PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022994082.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 317aa    MW: 36325.4 Da    PI: 4.6466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022994082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.6e-1593139353
             AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     ykGVr++k +g+++AeIrd +     r +r +lg++ taeeAa a+ + + ++
  XP_022994082.1  93 YKGVRRRK-WGKYAAEIRDpF-----RgRRLWLGTYNTAEEAAVAYQRKKHEF 139
                     9****998.**********66.....56*****************98877766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MYGKEEKKMK QLREGKSISM RKVRVLFHDP DATDYSSEED EHVNQDAKNI VWEISVPDIR  60
HKISKESSHG GKIRTKAEVK PSSSRTQRSS SMYKGVRRRK WGKYAAEIRD PFRGRRLWLG  120
TYNTAEEAAV AYQRKKHEFE SIQSMAKGSG ELGREQRDGS VADYTDESEN IIALFSHPSP  180
SSVLDVCCES LCSNVDQTME HSITEGCMPV VDDEDILKSI YEDEQSILDI VEATPTPTPT  240
SITLPRLDTQ ELDFQVLEDN SLIFNDFDQF FHDTNFRDNY TLHSIENSVG ALDLPPMDME  300
FDKEFSWFDD TMSISCM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.19e-22ERF family protein