PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994064.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1391aa MW: 152970 Da PI: 7.3679

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.7e-07	968	1008	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+ ++g ++ qck ++ XP_022994064.1 968 YWTDGEKSHFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 1008 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1391 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT 180 NQRRDQEYSV SSSGWKPLKW TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL 240 QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST 300 HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS 360 GFQNQYEGTS SVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS 420 KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV 480 TSANTISKPM EHSTSDLEEV PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV 540 DNNMIIKSEG VTLEPISSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK 600 LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK 660 SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP GNLNHPVSNA EILKHMSMQL SSPQIKQYRT 720 TLKMPALILD QKDKMASRFI SNNGLVENPC AVEKERAMIN PWSSEEKDVF MEKLDCFGKD 780 FGKIASFLDH KTTADCIEFY YKNHKSDCFE KTKKLEFGKK VKSTSNYLMT TGKKWNSEAN 840 AASLDMLGAA MVRAHKYSSS RPGGRTAYCT TQFDDDLSER PKSFHGFGNE REKVAADVLA 900 GICGSLSSEA LGSCVTSNFD RGDGSQDLKC KMGGATTILR RRITNNVPQC VDDEIFSDES 960 CGEMDPSYWT DGEKSHFIEA VSVYGKNFSM ISTHVGSKST DQCKVFFSKA RKCLGLDVLC 1020 SAKKMPEDGN SHGASANGGD CEAGVDTKDA FPCKWVSSQM VDDLPKSVTS ISGGETESKN 1080 LQSIHQEVKE SNPSSKTCSN AAVDAMGSDD ACNRKDGFLS GFDDDCQSVN STHNKNGLVL 1140 EQRHALVSAE TAKEQGISAL VAALVGNDSN AETKGRVSDK AHSHTADNSS MPLNTHVISL 1200 SKEEQGCHHV RVHSRSLSDS EQSSRNGDLK LFGQILTHSS SVPSSKSGSS ENGNRTELHH 1260 KLKCRLKVNS HGNLITAKFD RKNSSGQEED APSRSYGFWD GSRMRTGFSS LPDPTTLLSR 1320 YPTFDHCSKT VSLIEQQPIC NGQKSNSNQM SEVNSSKVGI IVGKNCNDDD DDDASDTKLH 1380 CNKAAEGGGG S

Sequence ? help Back to Top

Protein Sequence Length: 1391 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT  180
NQRRDQEYSV SSSGWKPLKW TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL  240
QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST  300
HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS  360
GFQNQYEGTS SVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS  420
KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV  480
TSANTISKPM EHSTSDLEEV PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV  540
DNNMIIKSEG VTLEPISSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK  600
LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK  660
SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP GNLNHPVSNA EILKHMSMQL SSPQIKQYRT  720
TLKMPALILD QKDKMASRFI SNNGLVENPC AVEKERAMIN PWSSEEKDVF MEKLDCFGKD  780
FGKIASFLDH KTTADCIEFY YKNHKSDCFE KTKKLEFGKK VKSTSNYLMT TGKKWNSEAN  840
AASLDMLGAA MVRAHKYSSS RPGGRTAYCT TQFDDDLSER PKSFHGFGNE REKVAADVLA  900
GICGSLSSEA LGSCVTSNFD RGDGSQDLKC KMGGATTILR RRITNNVPQC VDDEIFSDES  960
CGEMDPSYWT DGEKSHFIEA VSVYGKNFSM ISTHVGSKST DQCKVFFSKA RKCLGLDVLC  1020
SAKKMPEDGN SHGASANGGD CEAGVDTKDA FPCKWVSSQM VDDLPKSVTS ISGGETESKN  1080
LQSIHQEVKE SNPSSKTCSN AAVDAMGSDD ACNRKDGFLS GFDDDCQSVN STHNKNGLVL  1140
EQRHALVSAE TAKEQGISAL VAALVGNDSN AETKGRVSDK AHSHTADNSS MPLNTHVISL  1200
SKEEQGCHHV RVHSRSLSDS EQSSRNGDLK LFGQILTHSS SVPSSKSGSS ENGNRTELHH  1260
KLKCRLKVNS HGNLITAKFD RKNSSGQEED APSRSYGFWD GSRMRTGFSS LPDPTTLLSR  1320
YPTFDHCSKT VSLIEQQPIC NGQKSNSNQM SEVNSSKVGI IVGKNCNDDD DDDASDTKLH  1380
CNKAAEGGGG S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-121	MYB family protein