PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022994063.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1392aa MW: 153041 Da PI: 7.3679

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022994063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.7e-07	969	1009	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E +++av +G++ ++ I+ ++g ++ qck ++ XP_022994063.1 969 YWTDGEKSHFIEAVSVYGKN-FSMISTHVG-SKSTDQCKVFFS 1009 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1392 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW 120 TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT 180 NQRRDQEYSV SSSGWKPLKW TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL 240 QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST 300 HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS 360 GFQNQYEGTS SVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS 420 KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV 480 TSANTISKPM EHSTSDLEEV PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV 540 DNNMIIKSEG VTLEPISSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK 600 LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK 660 SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSPQIKQYR 720 TTLKMPALIL DQKDKMASRF ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLDCFGK 780 DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA 840 NAASLDMLGA AMVRAHKYSS SRPGGRTAYC TTQFDDDLSE RPKSFHGFGN EREKVAADVL 900 AGICGSLSSE ALGSCVTSNF DRGDGSQDLK CKMGGATTIL RRRITNNVPQ CVDDEIFSDE 960 SCGEMDPSYW TDGEKSHFIE AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL 1020 CSAKKMPEDG NSHGASANGG DCEAGVDTKD AFPCKWVSSQ MVDDLPKSVT SISGGETESK 1080 NLQSIHQEVK ESNPSSKTCS NAAVDAMGSD DACNRKDGFL SGFDDDCQSV NSTHNKNGLV 1140 LEQRHALVSA ETAKEQGISA LVAALVGNDS NAETKGRVSD KAHSHTADNS SMPLNTHVIS 1200 LSKEEQGCHH VRVHSRSLSD SEQSSRNGDL KLFGQILTHS SSVPSSKSGS SENGNRTELH 1260 HKLKCRLKVN SHGNLITAKF DRKNSSGQEE DAPSRSYGFW DGSRMRTGFS SLPDPTTLLS 1320 RYPTFDHCSK TVSLIEQQPI CNGQKSNSNQ MSEVNSSKVG IIVGKNCNDD DDDDASDTKL 1380 HCNKAAEGGG GS

Sequence ? help Back to Top

Protein Sequence Length: 1392 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDEYG HGYGPSMSFN NKMLENVSSR PSVSHGDGKY PRNARESRSF SQRDWKGHSW  120
TTSNGSTNSG GRLQHDLNYD QRSVNDMLIY PSHSHSDFVN SRDKVKGQHD KVDDVNGLGT  180
NQRRDQEYSV SSSGWKPLKW TRSGALSSRT STSGHSSSTR IAGALDSNEA KSETVLKNAL  240
QNLSPSADSA ECAMSSLPYD EATVRKKPRL GWGEGLAKYE KKKVEVPDAT AFTNVHAEST  300
HSLNSSLIEK GPRCSGFSDR TSPAPHSFVI SGSSPGGDEK SSGKASIDND VSDLHGSPGS  360
GFQNQYEGTS SVEKLNDFSI AKLCAPLIPL LQSSDSISED SSFMSSTALS KLLLYKKEIS  420
KVLETTESEI DLLENELKGL ISDSKGYFSF PLASRSFLEG DKYFEEKNDV TNTVATMPVV  480
TSANTISKPM EHSTSDLEEV PADAKGMDRS GRLDVKESVI TKEYLTISGC SVKDNVVASV  540
DNNMIIKSEG VTLEPISSDI YEFADEKGDS VLDLILASNK ESACKASEAL TRPLPADEHK  600
LDIWSTNAFS QNQCLVKERF AKRKRLLKFK ERVITLKYRA YQSLWKESFH VPPVRKLRAK  660
SQKKYQLSLW TNYSGYQKNR SSIRFRMPSP AGNLNHPVSN AEILKHMSMQ LSSPQIKQYR  720
TTLKMPALIL DQKDKMASRF ISNNGLVENP CAVEKERAMI NPWSSEEKDV FMEKLDCFGK  780
DFGKIASFLD HKTTADCIEF YYKNHKSDCF EKTKKLEFGK KVKSTSNYLM TTGKKWNSEA  840
NAASLDMLGA AMVRAHKYSS SRPGGRTAYC TTQFDDDLSE RPKSFHGFGN EREKVAADVL  900
AGICGSLSSE ALGSCVTSNF DRGDGSQDLK CKMGGATTIL RRRITNNVPQ CVDDEIFSDE  960
SCGEMDPSYW TDGEKSHFIE AVSVYGKNFS MISTHVGSKS TDQCKVFFSK ARKCLGLDVL  1020
CSAKKMPEDG NSHGASANGG DCEAGVDTKD AFPCKWVSSQ MVDDLPKSVT SISGGETESK  1080
NLQSIHQEVK ESNPSSKTCS NAAVDAMGSD DACNRKDGFL SGFDDDCQSV NSTHNKNGLV  1140
LEQRHALVSA ETAKEQGISA LVAALVGNDS NAETKGRVSD KAHSHTADNS SMPLNTHVIS  1200
LSKEEQGCHH VRVHSRSLSD SEQSSRNGDL KLFGQILTHS SSVPSSKSGS SENGNRTELH  1260
HKLKCRLKVN SHGNLITAKF DRKNSSGQEE DAPSRSYGFW DGSRMRTGFS SLPDPTTLLS  1320
RYPTFDHCSK TVSLIEQQPI CNGQKSNSNQ MSEVNSSKVG IIVGKNCNDD DDDDASDTKL  1380
HCNKAAEGGG GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-123	MYB family protein