PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993817.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 398aa    MW: 43720.1 Da    PI: 9.5151
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00036166188223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ Cg++F  ++ L+ H ++ H
  XP_022993817.1 166 PCSECGEVFMKPEALELHKSVrH 188
                     7*****************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MASAMAKPKT QTKLSRQTHE NQKPKPPSWA VVRGIFSCKY LQPQQPQEKR QQQEQATEES  60
RKNCKKMRCS GSLCNNTKVT HEVHKNRALS SSSSRYSKAP PLNEQNDIPS AICSSLSASS  120
SSNSSSGASF RGMPFRKFYG CYECKMVINP VNGMARDTFL RATIWPCSEC GEVFMKPEAL  180
ELHKSVRHAV SELGPEDTSK NIVEIIFQSS WLKKQTPICK IERILKIHNT SKTISRFEEY  240
RDSIKGKAIK LSKKHPRCIA DGNELLRFHC TTLACSLGLN GSSNLCSSIP QCNVCSIIKH  300
GFKLAAEAPG GDAGKGILTT ATSGKAHDSA GMSLDGKDKR AMLVCRVIAG RVKKSSESSV  360
EDYDSLAGEA GLYSNLDELY VFSPKAILPC FVVIYGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.15e-94C2H2 family protein