PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993743.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 448aa MW: 49869.2 Da PI: 7.6156

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.8	7.7e-16	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_022993743.1 58 RERWKEEEHDKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 102 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MGAAGMQFQN TGGGLCSNNM NSAVYESTVT PDQHSSANVQ LKEFAPKARK PYTITKQRER 60 WKEEEHDKFI EALKLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVTRNS NGCSTNLVGC 120 IEIPPPRPKR KPAHPYPRKE VAHSHKLSSI SEQTRSLSPQ LSEKECQSPT STVIAATSGS 180 DTLMFANSRI HHDSASPDSS VPSSLDNESP TAAAPVPENS TLHEKTSKNL ELFTKDDMHE 240 KDDSTKEPSL QSLKLFGRTV LISDPHKQTP IIETCSSKAD SKPGENQKQI SPRKSPTGNP 300 ESTWNHGAFY FIQLNSVDSN QGAGSTVPVS WWSSYGSYPI SFVHCFNQAH SNPSREVDDR 360 EAHKDQSWCG SNTGSLNSGE NDIQSSSSRV FQNRDEMIGK ALSCELISSH EKNTEGFVPY 420 KRCMTERATQ SHTITDTERE EKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MGAAGMQFQN TGGGLCSNNM NSAVYESTVT PDQHSSANVQ LKEFAPKARK PYTITKQRER  60
WKEEEHDKFI EALKLYGRDW RQIEEHVGTK TAVQIRSHAQ KFFSKVTRNS NGCSTNLVGC  120
IEIPPPRPKR KPAHPYPRKE VAHSHKLSSI SEQTRSLSPQ LSEKECQSPT STVIAATSGS  180
DTLMFANSRI HHDSASPDSS VPSSLDNESP TAAAPVPENS TLHEKTSKNL ELFTKDDMHE  240
KDDSTKEPSL QSLKLFGRTV LISDPHKQTP IIETCSSKAD SKPGENQKQI SPRKSPTGNP  300
ESTWNHGAFY FIQLNSVDSN QGAGSTVPVS WWSSYGSYPI SFVHCFNQAH SNPSREVDDR  360
EAHKDQSWCG SNTGSLNSGE NDIQSSSSRV FQNRDEMIGK ALSCELISSH EKNTEGFVPY  420
KRCMTERATQ SHTITDTERE EKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	3e-46	MYB_related family protein