PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993171.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 407aa    MW: 45466.7 Da    PI: 7.9052
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993171.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000313023361655
                     HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     i +++ +L++++ +      +K + a++L +++ YIk Lq
  XP_022993171.1 302 IGDRITTLQQIVSPF-----GKTDTASVLNETIGYIKFLQ 336
                     778999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    
MADDCTDSSV ATSSTPPNWW NTHNHHHHHH YNSNSSCDDD VFISTSSFTN ASNHSALTLD  60
SSSSAAAAAH LLPHHASDHH LWTQVLLNIG NGVEEIQPNF LEPIACSDYL KKMDTHTNWD  120
DTFQTFNNNN GLLTTLENER LLKLSNLVNT WSIALPSPDA HLRHLMDQEP HPLRPTTLLD  180
PDSALDPCAS AFFRRSLHNP MPAKPFATTR NYGDYISFNP RFAKPLLGVN PSINSLNLSA  240
QSKKQIRQIS SPTRGSGRGG GVLNEGKKKR SEESSETVTK KAKQDNSTTP ASTKIQQPKV  300
KIGDRITTLQ QIVSPFGKTD TASVLNETIG YIKFLQEQVQ LLTNPYMKTN SYKDAWQSLE  360
RKESKGEGKM ELRSRGLCLV PISCTPQVYR ENSGSDYWTP YRGCFYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31050.11e-43bHLH family protein