PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022993133.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 722aa MW: 80328 Da PI: 4.7543

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022993133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.9	7.3e-11	593	636	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +W++ + e++++av+q+G++ + I + ++ gRt+ q+k+++ + XP_022993133.1 593 RTKWSKHDTERFYEAVRQFGTD-FCMIQQLFP-GRTRHQIKLKFKN 636 789*****************.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDVRG 60 NTKSIKSSSQ LAVIEENKES EDDLLLATVR SDFIGCSHHT SVESAIMVDS TQLDLDSCGG 120 ILPSGSTIDG PVGVENLTDD SKNSGILNCS HSSASGAHEA TVLGQSGLGS IQPEDGHSND 180 GKIAGQNTDV FYDLEWLDDF HNQPKNEADP SSLKQATISN EDGDLDKQRL EVEECGAGAN 240 ITEDTISSGT TTEQPACKYI PKPKMRIAGD SCTQISQPEI SNTLPPSPQV ISCDTKCMHE 300 ASIGTHSDGV LNDSSINFDD YSPVNQHIEA PVNVESLAYD SYGDILVDDF NSDDQDEMLR 360 EEGGKNGEED PSSRSNMSQQ QEMFPPVGEE IEHSKTSRKL RQQVSHQLGD PEDGVDDFPS 420 ERFSNCDIHG DGYKKNETSK GRRGTKTKTK SLKPSSDNEK PTRKRKEANK AVPDLQAEKR 480 PKKFSHSTRR NRRQVNKVLL ETPEDEIDFQ KISFRDLIIY HEHKEKLEKK EATTRQSATN 540 QRTDTVGEEI YNDGEESLAD EQGRGTDDDE TPDVVDMTSA YFNYHSFMDK TSRTKWSKHD 600 TERFYEAVRQ FGTDFCMIQQ LFPGRTRHQI KLKFKNEERH HPFRLSDAIT NRAKDHSQFL 660 SLIGQLQEAA NKAKHESNED ELTENTGNEE LGELSPEINV CRLSLVLLSD FRCSSACTFL 720 SL

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MDPFDEILSD PGFTSRTGGR FQPKIKPRPK KQTLAPQLST VSQDKKGTTS DAKSCHDVRG  60
NTKSIKSSSQ LAVIEENKES EDDLLLATVR SDFIGCSHHT SVESAIMVDS TQLDLDSCGG  120
ILPSGSTIDG PVGVENLTDD SKNSGILNCS HSSASGAHEA TVLGQSGLGS IQPEDGHSND  180
GKIAGQNTDV FYDLEWLDDF HNQPKNEADP SSLKQATISN EDGDLDKQRL EVEECGAGAN  240
ITEDTISSGT TTEQPACKYI PKPKMRIAGD SCTQISQPEI SNTLPPSPQV ISCDTKCMHE  300
ASIGTHSDGV LNDSSINFDD YSPVNQHIEA PVNVESLAYD SYGDILVDDF NSDDQDEMLR  360
EEGGKNGEED PSSRSNMSQQ QEMFPPVGEE IEHSKTSRKL RQQVSHQLGD PEDGVDDFPS  420
ERFSNCDIHG DGYKKNETSK GRRGTKTKTK SLKPSSDNEK PTRKRKEANK AVPDLQAEKR  480
PKKFSHSTRR NRRQVNKVLL ETPEDEIDFQ KISFRDLIIY HEHKEKLEKK EATTRQSATN  540
QRTDTVGEEI YNDGEESLAD EQGRGTDDDE TPDVVDMTSA YFNYHSFMDK TSRTKWSKHD  600
TERFYEAVRQ FGTDFCMIQQ LFPGRTRHQI KLKFKNEERH HPFRLSDAIT NRAKDHSQFL  660
SLIGQLQEAA NKAKHESNED ELTENTGNEE LGELSPEINV CRLSLVLLSD FRCSSACTFL  720
SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	6e-37	MYB_related family protein