PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022993103.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 598aa    MW: 64981.1 Da    PI: 4.6292
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022993103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS444.95.4e-1362255911374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++Ll+cAeav++++++la+al++++  la++++ +m+++a+yf++ALa+r+++    +y+      +s    s+ l++   f+e++P+lkf+h
  XP_022993103.1 225 LVHALLACAEAVQQENMKLADALVKHIGFLAASQAGAMRKVATYFAQALARRIYG----IYSPQDGLYSS---YSDPLQM--HFYETCPYLKFAH 310
                     689***************************************************9....77544333333...5566555..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     +taNqaIlea++++ rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+++p+++  +++l+++g++La++Ae++gv+fefn +v+++ledl
  XP_022993103.1 311 FTANQAILEAFATAARVHVIDFSLNQGMQWPALMQALALRPGGPPAFRLTGISPPQPDnTADSLQQVGWKLAQMAEAIGVEFEFNHIVCSNLEDL 405
                     **********************************************************999********************************** PP

            GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres.e 280
                     ++ +L+++p   Ea+aVn+v+ lhrll++++++e+    vL l+++++Pk+v++veqea+hn++ Fl+rf+eal+yys lfdsl  ++++ e  +
  XP_022993103.1 406 DPAALKIRPtaVEAVAVNSVFDLHRLLARPGAIEK----VLGLINTTQPKIVTIVEQEANHNGPIFLDRFTEALHYYSNLFDSLeGSSIGFEPaN 496
                     *********999***********************....*********************************************65666655459 PP

            GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     e++ +++++lgr+i+nvvaceg++r+erhe+l +Wr r+e++GF pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+
  XP_022993103.1 497 EDVLLSEVYLGRQICNVVACEGTDRVERHESLTQWRTRIESSGFDPVHLGSNAFKQASMLLALFAgGEGYRVEENNGCLMLGWHTRPLIATSAWQ 591
                     **********************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 598 aa     Download sequence    
MKRELEEDRS TADAGRRVVK GECSSLSGGK LKMWEEEEEQ DANGGGGGGM DELLAVLGYK  60
VRASDMADVA LKMEQLEMVM GTAQEDGISH LASDTVHYNP SDLSAWVQNM LSEFNNSTNP  120
NPQSSLYSDS LHGIQSTTSC LYDDDSEYDL SAIPGVALLP PKDSSTEIET HVRKRLKIGG  180
ESSGHLSPSP SSSSPPFVTT AGIVSEPSRS VVVVGEDSQE TGIQLVHALL ACAEAVQQEN  240
MKLADALVKH IGFLAASQAG AMRKVATYFA QALARRIYGI YSPQDGLYSS YSDPLQMHFY  300
ETCPYLKFAH FTANQAILEA FATAARVHVI DFSLNQGMQW PALMQALALR PGGPPAFRLT  360
GISPPQPDNT ADSLQQVGWK LAQMAEAIGV EFEFNHIVCS NLEDLDPAAL KIRPTAVEAV  420
AVNSVFDLHR LLARPGAIEK VLGLINTTQP KIVTIVEQEA NHNGPIFLDR FTEALHYYSN  480
LFDSLEGSSI GFEPANEDVL LSEVYLGRQI CNVVACEGTD RVERHESLTQ WRTRIESSGF  540
DPVHLGSNAF KQASMLLALF AGGEGYRVEE NNGCLMLGWH TRPLIATSAW QLAPDGSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein