PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992880.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 207aa    MW: 22988.6 Da    PI: 8.3408
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992880.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.45.9e-09117160755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+ +       K++ +++LekA+ Y+k Lq
  XP_022992880.1 117 IAAKNRRERISERLKILQELVLNG-----SKVDLVTMLEKAISYVKFLQ 160
                     5679******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MALANSAEQE QQISDSLINF KCGIGNKEPL LSFEPQGVCQ LDTHNWDQQR AMEDPSPPKH  60
HGDHDPLYGW LSDDITGNHK RSHTTGNSSG GVCKKQCTFA AEKQGPRSST AKDPQSIAAK  120
NRRERISERL KILQELVLNG SKVDLVTMLE KAISYVKFLQ LQVKILATDK FWSIQGGKAP  180
DISQVREAID AILSSQRERS SSXNSQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-49bHLH family protein