PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022992321.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 354aa    MW: 39004.7 Da    PI: 7.2884
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022992321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.3e-13115159347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022992321.1 115 PWTEEEHRLFLVGLQKLGKGDWRGISRNFVITRTPTQVASHAQKY 159
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MTRRCSHCSN NGHNSRTCPS RSGRTGSAAL AGGGGGSCGV KLFGVRLTDG SFIKKSASMG  60
NLSVHYHSSS SAAASPNPDS PNSDPVHDTD GFLSDDPTHA SCSTNRRGER KKGVPWTEEE  120
HRLFLVGLQK LGKGDWRGIS RNFVITRTPT QVASHAQKYF IRQSNSTRRK RRSSLFDMVP  180
EMASDPLPMP ADEVLHASQA KETENSSSQP SLNLSLNSEF HMMETTVEEN GNELDATKME  240
VAGFPHMIPG FIPAYMPLPF RIWAPSTFPM EEEKGVEMCH HEVLRPIPVV PKEPVNVDEL  300
VGLSQLTLRE HEGEHREHSP LSLRLIGEGL RQSAFHPKTP VSRSNFNKDD NDTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.12e-85MYB_related family protein