PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991903.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 376aa    MW: 42083.8 Da    PI: 8.0742
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991903.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.91.6e-12313358655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri +++ +L+el P      +k  s a++Le+A+eYIk Lq
  XP_022991903.1 313 SIAERMRRIRISERMKKLQELFPDM----DKQTSTADMLELAIEYIKGLQ 358
                     689*********************7....688*****************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    
MSLLCSPNFI FSNDEVKKYP DFMDCDSTNN HVSQQENPNS APHSLIASLV NGTEGFDSSN  60
NGGGGREDYR FIRSSSPEVE AFLSRFMASY NEETFDSGSD ERAVKQEMGE SVRQHNEFCN  120
QSSSMVNSAG GAQIGNLFRV MHSSDYAARN SANLFRQSSS PAGFFSNLAP QNGNAARDIQ  180
KFGSCSRKDV DVAYPYSRIG SQMNISGQSF ASTHMPPIAE EENKRIRAVR SSWDSSTIRD  240
LKRGRDNNGR TFPTSILLET QNADSGNDIR GLAHHLSLPI TFNKDPVEKF LRFEEPVRHQ  300
IRAKRGCATH PRSIAERMRR IRISERMKKL QELFPDMDKQ TSTADMLELA IEYIKGLQRQ  360
VKTLTDTKAK CTCSGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.14e-40bHLH family protein