PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022991903.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 376aa MW: 42083.8 Da PI: 8.0742 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.9 | 1.6e-12 | 313 | 358 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el P +k s a++Le+A+eYIk Lq XP_022991903.1 313 SIAERMRRIRISERMKKLQELFPDM----DKQTSTADMLELAIEYIKGLQ 358 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence |
MSLLCSPNFI FSNDEVKKYP DFMDCDSTNN HVSQQENPNS APHSLIASLV NGTEGFDSSN 60 NGGGGREDYR FIRSSSPEVE AFLSRFMASY NEETFDSGSD ERAVKQEMGE SVRQHNEFCN 120 QSSSMVNSAG GAQIGNLFRV MHSSDYAARN SANLFRQSSS PAGFFSNLAP QNGNAARDIQ 180 KFGSCSRKDV DVAYPYSRIG SQMNISGQSF ASTHMPPIAE EENKRIRAVR SSWDSSTIRD 240 LKRGRDNNGR TFPTSILLET QNADSGNDIR GLAHHLSLPI TFNKDPVEKF LRFEEPVRHQ 300 IRAKRGCATH PRSIAERMRR IRISERMKKL QELFPDMDKQ TSTADMLELA IEYIKGLQRQ 360 VKTLTDTKAK CTCSGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 4e-40 | bHLH family protein |