PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991858.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 710aa MW: 78435.8 Da PI: 10.3587

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.3	9.4e-10	15	64	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwq 45 +W t+E++ll++avk++G ++W++++ +++ + t+ +c ++++ XP_022991858.1 15 SWGTWEELLLACAVKRHGFKDWSSVSIEVQsrsslphLLTTARNCELKFL 64 6*****************************66666665556666666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MADDKEKERE HGTASWGTWE ELLLACAVKR HGFKDWSSVS IEVQSRSSLP HLLTTARNCE 60 LKFLDLKRRF TSCQNGSGIA DKVDTSVPWV DELRKLRVAE LRREVQRYDV SINSLQLKVK 120 KLEEEREQGM SDREASTGKP DLKMESRERR SENDKKLFVE PDHRSGINGT VAKPPAVPGE 180 DSDREDFSVN QSNSTGSKSG NRKSTAENDK SETKPEFTGS YRPEQNRRAA EPADPQSDDG 240 STDTVVKNST CDISETKKKE TQRVDDLFEL ADSEAQSNGG ETATRESSEV QSSASLTGRM 300 KRKRLLKKEI SGGSSGNEPR RTPAVKSRPF DEVLQMIRAH KHSSLFESRL QSQETEEYKG 360 MVRQHLDLET VQAKINSGSY SSSTHAFYRD LLLLFNNVVT FFPKSSKESV AARELCILVS 420 IEMKKALQVA QIDPSPEVVD SSPTIPSRSK GPDLEGSQSL LAKQKSSVPI IVCRKRSKIS 480 SKLSSTTGLG EKGERSNDDE KLAVDLKSSI KIASTNPVED QGTAKDSKVK EKPITGARSM 540 RRSNDSATNS SGPTIKKQNT NSGWKPSSGN ETETQIPIPI PIPDKKKSDT VTLEKKRSAA 600 DFLKRIKQNS PAETTTKRTG RGGSSSSVVN TAAEQKKGSG GKSEKGKERV LAIRQSNNKK 660 RLKEDGSSPS KRSVGRPPKK AAEADPTPIK RAREGVGKEP LKRPKKRARR

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MADDKEKERE HGTASWGTWE ELLLACAVKR HGFKDWSSVS IEVQSRSSLP HLLTTARNCE  60
LKFLDLKRRF TSCQNGSGIA DKVDTSVPWV DELRKLRVAE LRREVQRYDV SINSLQLKVK  120
KLEEEREQGM SDREASTGKP DLKMESRERR SENDKKLFVE PDHRSGINGT VAKPPAVPGE  180
DSDREDFSVN QSNSTGSKSG NRKSTAENDK SETKPEFTGS YRPEQNRRAA EPADPQSDDG  240
STDTVVKNST CDISETKKKE TQRVDDLFEL ADSEAQSNGG ETATRESSEV QSSASLTGRM  300
KRKRLLKKEI SGGSSGNEPR RTPAVKSRPF DEVLQMIRAH KHSSLFESRL QSQETEEYKG  360
MVRQHLDLET VQAKINSGSY SSSTHAFYRD LLLLFNNVVT FFPKSSKESV AARELCILVS  420
IEMKKALQVA QIDPSPEVVD SSPTIPSRSK GPDLEGSQSL LAKQKSSVPI IVCRKRSKIS  480
SKLSSTTGLG EKGERSNDDE KLAVDLKSSI KIASTNPVED QGTAKDSKVK EKPITGARSM  540
RRSNDSATNS SGPTIKKQNT NSGWKPSSGN ETETQIPIPI PIPDKKKSDT VTLEKKRSAA  600
DFLKRIKQNS PAETTTKRTG RGGSSSSVVN TAAEQKKGSG GKSEKGKERV LAIRQSNNKK  660
RLKEDGSSPS KRSVGRPPKK AAEADPTPIK RAREGVGKEP LKRPKKRARR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	702	710	KRPKKRARR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	2e-96	MYB_related family protein