PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991815.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 539aa MW: 59101.7 Da PI: 5.7987

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.5	3.8e-16	320	366	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+k Lq XP_022991815.1 320 VHNLSERRRRDRINEKMKALQELIPRC-----NKTDKASMLDEAIEYLKTLQ 366 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MVGRLRMNHC VPDFEMADDF SLPTFSNLTR PRKSSLPDDD VVELLWQNGQ VVTHSQNQRT 60 VRKSPPSKFD GSIPQDQAAV REIRPSAHLE EPHELFMQED EMAAWLNYPL VEDHNFCSDL 120 LFPAISVPLC ANPQPELRPS TTATVTLTPR PPIPPSRIPE AQTSMQSSRN KATGESEPLN 180 SKVMVRESTM VDSCDTPSVG PDSRASEMVR RKLVEVVSCG DVRYETSRGN GGIGGSSVGG 240 DGIGDKEMTT CEITITSSPG DSSASAEPPC PKLAADDRKR KGRALDDTEC QSDDVDYESA 300 DLKRQMQGST STKRSRAAEV HNLSERRRRD RINEKMKALQ ELIPRCNKTD KASMLDEAIE 360 YLKTLQLQVQ MMSMGCGMMP MMFPGVQQYL PQPMGMGMGM GMGMGMEMGM NRPMMQFHNL 420 LAGSNLPMQA GAAAAAAAAH MGPRFPLPPF AMSPVPDSDQ SRAQATNNQL NPMANSVGTQ 480 NATPPSVSGF PDSYQQFLSS NQMPFHMAQP LQNHQPVQPN TIRPGTSRVP ENHENHQSG

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MVGRLRMNHC VPDFEMADDF SLPTFSNLTR PRKSSLPDDD VVELLWQNGQ VVTHSQNQRT  60
VRKSPPSKFD GSIPQDQAAV REIRPSAHLE EPHELFMQED EMAAWLNYPL VEDHNFCSDL  120
LFPAISVPLC ANPQPELRPS TTATVTLTPR PPIPPSRIPE AQTSMQSSRN KATGESEPLN  180
SKVMVRESTM VDSCDTPSVG PDSRASEMVR RKLVEVVSCG DVRYETSRGN GGIGGSSVGG  240
DGIGDKEMTT CEITITSSPG DSSASAEPPC PKLAADDRKR KGRALDDTEC QSDDVDYESA  300
DLKRQMQGST STKRSRAAEV HNLSERRRRD RINEKMKALQ ELIPRCNKTD KASMLDEAIE  360
YLKTLQLQVQ MMSMGCGMMP MMFPGVQQYL PQPMGMGMGM GMGMGMEMGM NRPMMQFHNL  420
LAGSNLPMQA GAAAAAAAAH MGPRFPLPPF AMSPVPDSDQ SRAQATNNQL NPMANSVGTQ  480
NATPPSVSGF PDSYQQFLSS NQMPFHMAQP LQNHQPVQPN TIRPGTSRVP ENHENHQSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	330	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	2e-71	bHLH family protein