PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991706.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 456aa MW: 51188.4 Da PI: 9.6311

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991706.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.4	3.3e-08	110	151	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_022991706.1 110 SWTKEETDQLFDLCERFDLR-FVVIADRFPSTRTVEELKERYY 151 7*****************.*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDAKDILGLP KNTLPLSQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFSNSAR KDNLQLYHWV RVVNGIPPIG DYSFAKYNKS WTKEETDQLF 120 DLCERFDLRF VVIADRFPST RTVEELKERY YHASKAILGA RGPTSREGSG NTPAKDPFNV 180 SQEIDRKRAL SMVLSQTKQK ERKDAEVLAE AKKIIESRKA ERVAEESKLA VTSNTVPEVT 240 ERAVVPGESV ASVSNVQPPP PAAVPSTVVA DNASTLASLR MLPVYLRTYA LEQMVHAASS 300 SAGLRTIKRV EQTLQDLSVN LKPRVPTKAV CAEHLELRKE ILTLLNLQKQ LQNKEAEGSS 360 FRESPYSEAP GTPKDRAFIA DSMNFGGKWV RFFQKSTGEN LGDHFVYTYC GKGLLNGTKN 420 ERPLEDYLKL HHHQLNLIKG QENRRDPICD PPVVCI

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDAKDILGLP KNTLPLSQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK  60
RPPSDEKITW QWLPFSNSAR KDNLQLYHWV RVVNGIPPIG DYSFAKYNKS WTKEETDQLF  120
DLCERFDLRF VVIADRFPST RTVEELKERY YHASKAILGA RGPTSREGSG NTPAKDPFNV  180
SQEIDRKRAL SMVLSQTKQK ERKDAEVLAE AKKIIESRKA ERVAEESKLA VTSNTVPEVT  240
ERAVVPGESV ASVSNVQPPP PAAVPSTVVA DNASTLASLR MLPVYLRTYA LEQMVHAASS  300
SAGLRTIKRV EQTLQDLSVN LKPRVPTKAV CAEHLELRKE ILTLLNLQKQ LQNKEAEGSS  360
FRESPYSEAP GTPKDRAFIA DSMNFGGKWV RFFQKSTGEN LGDHFVYTYC GKGLLNGTKN  420
ERPLEDYLKL HHHQLNLIKG QENRRDPICD PPVVCI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	32	KKPRAQKDAQRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47210.1	1e-160	MYB_related family protein