PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022991605.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 295aa    MW: 32168.9 Da    PI: 9.2691
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022991605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.91.1e-1394138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_022991605.1  94 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 138
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNAPRTCSLC GNNGHNSRTC PEGDGGGGGG FMLFGVRLTT TEGSSSFRKS VSMNNLSQFD  60
QPLSQDSNNA DAGYASDDVV HPSDRCRGRK RGIPWTEEEH RLFLLGLQKV GKGDWRGISR  120
NFVKTRTPTQ VASHAQKYFL RRNNFNRRRR RSSLFDITTD TFTSSSMEDD LVFSGHEALQ  180
PPLPPSQLLK DSKPGNFLLK IHPVKPPPAA GDDSNAENTI SSKILRPIPM LPLSPYPKFA  240
QLNINDRTPE DPLPLTLKLS TSHPEAQSPT AASQSSGNFQ TMSGGGDSID IVSVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.23e-61MYB_related family protein