PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022991191.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 304aa MW: 33838.8 Da PI: 7.1429

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022991191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.3	1.1e-17	84	136	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k XP_022991191.1 84 KKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWK 136 4568889*********************************************9 PP
2	HD-ZIP_I/II	126.6	1.1e-40	82	172	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl+ eqvk+LE+sFe +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlE+dy++Lk++++alk++n+ L++++++L++el XP_022991191.1 82 EKKKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDVLKKQFEALKADNDVLQAQNTKLHAEL 172 69**************************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MASPHHSHSF MFQSRPADHH DYAPTATASF NNIPFCPPHL YFHDGVVPLM MKRSMSFSGV 60 ENGCEEVNGD EGLSDDGSAL GEKKKRLNLE QVKALEKSFE LGNKLEPERK LQLAKALGLQ 120 PRQIAIWFQN RRARWKTKQL ERDYDVLKKQ FEALKADNDV LQAQNTKLHA ELLALKTKDS 180 GEVAAGGSAT VNLKKENERC WSSDNSCDIN LEISRTQAPI TSNGSNGGRG CSQPGIKDLF 240 PSAAFRSAAI TQLLQHGSSR STVNHSPVIQ EESFTQMFNG IEEQQQTTAA GFWPWSSDQN 300 SHFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	139	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	1e-84	HD-ZIP family protein