PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990826.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 486aa MW: 55137.9 Da PI: 6.1702

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990826.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	63.7	3.4e-20	216	268	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 r++W+++LH++F ea+++L G+ k Pk il++m+ ++Ltl +v+SHLQk+++ XP_022990826.1 216 SRIVWSSKLHRKFTEALSKL-GNRKSSPKIILKMMNEPSLTLRQVASHLQKFKS 268 79****************.9****************************86 PP
2	Myb_DNA-binding	34.2	5.9e-11	219	267	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ ++ ++ +a +lG++ ++k I ++m+ +tl q+ s++qk++ XP_022990826.1 219 VWSSKLHRKFTEALSKLGNRksSPKIILKMMNePSLTLRQVASHLQKFK 267 6**********************************************96 PP
3	Response_reg	35.2	6.4e-13	15	118	1	107
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH.HHHH...ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell.kekd...pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl+vd ++ ++ ++++l++ y +v++++++++al+++ + ++ ++l++ ++m++l ++ + +pii+++ + ++++ +a+ XP_022990826.1 15 VLVVDHDKHSLQSIASMLQNFSY-KVTTTEEADAALTMIiE-EKhepFNLVMANATESNMNALSIMNQ-----TGIPIILMSPERDMKTSGRAIA 102 89*******************.**********963.44367**********9988743.....47**************** PP TTESEEEESS--HHHH CS Response_reg 92 aGakdflsKpfdpeel 107 + fl+Kp+++e++ XP_022990826.1 103 EWGYHFLEKPISMEDI 118 **********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MGSKGIPSFA KGIHVLVVDH DKHSLQSIAS MLQNFSYKVT TTEEADAALT MIIEEKHEPF 60 NLVMANATES NMNALSIMNQ TGIPIILMSP ERDMKTSGRA IAEWGYHFLE KPISMEDIEL 120 VWQIVYRKIR NPRARNLGEN TNQAKKSHNG GMFGRVLNVA GGVEWNPIEE EEEEEEKEKC 180 GNREARLKPS ATVFDYLETM NVEEKTNRNE RTHKRSRIVW SSKLHRKFTE ALSKLGNRKS 240 SPKIILKMMN EPSLTLRQVA SHLQKFKSQV KHLNKMTESD ASTSLGTNQV QELPTKRNSM 300 TNILGQPSYS SNITGNQLRQ LQVPSCLNAH RLPSQDVFNC HLRMMNQQNS CSYKSTYGGF 360 EGTNLVFDDN NRIFTDELYM TESLSHSNFQ YFGGDHEDCP FLSADNHYPH AVQDLEFAQN 420 VAGCYDVDNI RSGAHSVIAG SLNQNVALKE LDDLLNNTEE DPMVYCCYDG KMNSFDIDQY 480 SEWLNA

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MGSKGIPSFA KGIHVLVVDH DKHSLQSIAS MLQNFSYKVT TTEEADAALT MIIEEKHEPF  60
NLVMANATES NMNALSIMNQ TGIPIILMSP ERDMKTSGRA IAEWGYHFLE KPISMEDIEL  120
VWQIVYRKIR NPRARNLGEN TNQAKKSHNG GMFGRVLNVA GGVEWNPIEE EEEEEEKEKC  180
GNREARLKPS ATVFDYLETM NVEEKTNRNE RTHKRSRIVW SSKLHRKFTE ALSKLGNRKS  240
SPKIILKMMN EPSLTLRQVA SHLQKFKSQV KHLNKMTESD ASTSLGTNQV QELPTKRNSM  300
TNILGQPSYS SNITGNQLRQ LQVPSCLNAH RLPSQDVFNC HLRMMNQQNS CSYKSTYGGF  360
EGTNLVFDDN NRIFTDELYM TESLSHSNFQ YFGGDHEDCP FLSADNHYPH AVQDLEFAQN  420
VAGCYDVDNI RSGAHSVIAG SLNQNVALKE LDDLLNNTEE DPMVYCCYDG KMNSFDIDQY  480
SEWLNA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68210.1	8e-32	ARR-B family protein