PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022990201.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1382aa MW: 151838 Da PI: 7.7523

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022990201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	974	1015	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT E l+++av+ +G++ ++ I+ ++g ++ qck ++ k XP_022990201.1 974 YWTDGEKSLFIEAVTVYGKN-FSMISTHVG-SKSMDQCKVFFCK 1015 5***************99.*****.******88876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1382 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDDYG HGYGPSMSFN NKILENVSSR PSISHGHGKY ARNSRESRSF SQRDWKSHTW 120 ATSNGSTNSG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT 180 NQRRDRDYSV SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQNAS 240 QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGS VITIVNAEAT 300 QSLNSSLIDK GPRGSGFFDC TSPATPSSVI CGSSPGGDEK SSGKASSDND VNNFGSPGSG 360 FQNQYEGSPA SNLEKLDRFS IPNLGSPLSQ LLQSTDSTSV DSRVVSFTAL SKLLAYKKEI 420 SKVLEMTETE IDLLENELKG LRSGSKGYFS SIPLASISLP VGDKCFEEHN NVTDMIPPVA 480 TLPVVTSTNN NSITMPHSTS DSEEVHADVK ENDQSDAKES VIMKEKLTLT GCSVEDNVVA 540 SVDNNMLIKS EGLALEPISS DIYEYADEGG DNVFDLILAS NKKSAREASE ALIRLLPANE 600 QKIDIWSTNA CSQNQCSMKE RFAKRKKLLR FKERVIALKF RAYQSLWKES LHVPPVRNLR 660 TKSQKKYQLS LWTNYSAYQK NRSSIRFRMP SPAGNLNPVS NTEIQKHVSK QLSNPQTKQY 720 RKTLKMPTLI LDKKDKMASR FISNNGLVED PCAVEKERMM INPWTSEEKD VFMEKLEYFG 780 KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKAKSSTGNY LITTGKKWNP 840 ETNAASLDIL GAASAMTACA HKYSSSRLGG RTACYTTQFD DNLSERAKSF HSFGNEREKV 900 AADVLAGICG SLSSEAMGSS CITGNFHRRD GSQDLKCKKG ATTILRRRMT ANLLQSVDDE 960 VCSDESCGEM DPSYWTDGEK SLFIEAVTVY GKNFSMISTH VGSKSMDQCK VFFCKARKCL 1020 GLDLICSAKK MPANGGDCNA NGFPCEAGVD RNAFPCEGVG NGGELESMNP QSTCQEVKEI 1080 NSHSNTAVDA MVSDACHRKD TSHSALDEDC QSVNSANDKN RLLHNHAVVS DETAKEQGNS 1140 SRVTVSVGNG LDAETKRGNI DTSTGQGAKA SAHTADSSSA SLNSHVTSVP KDEQGRLHVR 1200 VRSRSLSDSE QLSINGDVKL FGQILTHSSS VPSSSSNGNR TQHKFKRRLK ASSHGNLSTA 1260 KFSRKSSSGQ EDVPSRSYGI WDGTQLRKGL SSLPDPTTLL SRYPTFDNFS KSTSPIEQQQ 1320 QQQQPILNEQ KSNCDSQMSE VNSSKVAQEV VGGIIVGEIC NDDDDDALDT KLHCNKAEDG 1380 GS

Sequence ? help Back to Top

Protein Sequence Length: 1382 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDDYG HGYGPSMSFN NKILENVSSR PSISHGHGKY ARNSRESRSF SQRDWKSHTW  120
ATSNGSTNSG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT  180
NQRRDRDYSV SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQNAS  240
QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGS VITIVNAEAT  300
QSLNSSLIDK GPRGSGFFDC TSPATPSSVI CGSSPGGDEK SSGKASSDND VNNFGSPGSG  360
FQNQYEGSPA SNLEKLDRFS IPNLGSPLSQ LLQSTDSTSV DSRVVSFTAL SKLLAYKKEI  420
SKVLEMTETE IDLLENELKG LRSGSKGYFS SIPLASISLP VGDKCFEEHN NVTDMIPPVA  480
TLPVVTSTNN NSITMPHSTS DSEEVHADVK ENDQSDAKES VIMKEKLTLT GCSVEDNVVA  540
SVDNNMLIKS EGLALEPISS DIYEYADEGG DNVFDLILAS NKKSAREASE ALIRLLPANE  600
QKIDIWSTNA CSQNQCSMKE RFAKRKKLLR FKERVIALKF RAYQSLWKES LHVPPVRNLR  660
TKSQKKYQLS LWTNYSAYQK NRSSIRFRMP SPAGNLNPVS NTEIQKHVSK QLSNPQTKQY  720
RKTLKMPTLI LDKKDKMASR FISNNGLVED PCAVEKERMM INPWTSEEKD VFMEKLEYFG  780
KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKAKSSTGNY LITTGKKWNP  840
ETNAASLDIL GAASAMTACA HKYSSSRLGG RTACYTTQFD DNLSERAKSF HSFGNEREKV  900
AADVLAGICG SLSSEAMGSS CITGNFHRRD GSQDLKCKKG ATTILRRRMT ANLLQSVDDE  960
VCSDESCGEM DPSYWTDGEK SLFIEAVTVY GKNFSMISTH VGSKSMDQCK VFFCKARKCL  1020
GLDLICSAKK MPANGGDCNA NGFPCEAGVD RNAFPCEGVG NGGELESMNP QSTCQEVKEI  1080
NSHSNTAVDA MVSDACHRKD TSHSALDEDC QSVNSANDKN RLLHNHAVVS DETAKEQGNS  1140
SRVTVSVGNG LDAETKRGNI DTSTGQGAKA SAHTADSSSA SLNSHVTSVP KDEQGRLHVR  1200
VRSRSLSDSE QLSINGDVKL FGQILTHSSS VPSSSSNGNR TQHKFKRRLK ASSHGNLSTA  1260
KFSRKSSSGQ EDVPSRSYGI WDGTQLRKGL SSLPDPTTLL SRYPTFDNFS KSTSPIEQQQ  1320
QQQQPILNEQ KSNCDSQMSE VNSSKVAQEV VGGIIVGEIC NDDDDDALDT KLHCNKAEDG  1380
GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-126	MYB family protein