PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989677.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 367aa MW: 39828.6 Da PI: 9.1111

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120	2.9e-37	50	161	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++ s+s++ s + XP_022989677.1 50 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAVAGSVSQQGVSLSaglqqkle 144 789******************************************************************99977777776664444433433333 PP TCP 89 .............kaaksaakskksqksaasalnlak 112 + l + XP_022989677.1 145 elggggssraswgN--------------------LGR 161 34444333222330....................332 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MDPKTSSSTK QPQELVPNFL NFPQEHQQEQ SIMGENKPPE IKEEGKKQLA PKRSSNKDRH 60 TKVEGRGRRI RMPALCAARI FQLTRELGHK SDGETIQWLL QQAEPSIIAA TGTGTIPASA 120 LAAVAGSVSQ QGVSLSAGLQ QKLEELGGGG SSRASWGNLG RPHLAAAAAA AAAAAATATA 180 VWPSSVSGFG FQSSTTAGVA QSATNLANET SNYFHKLGFP AFDLPPTNMG PMSFTSILGA 240 NAQQLPGLEL GLSQDPHIGA INPQALNQFY QQMGQARVHH HHQQHQQPPA KDDSQDSGER 300 EREREIFTWF APPPPVNGNL SSSSSHARCD YLQLRAAWLE LNFIFLFVSL FKRRVDHVRQ 360 FYFFSSS

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MDPKTSSSTK QPQELVPNFL NFPQEHQQEQ SIMGENKPPE IKEEGKKQLA PKRSSNKDRH  60
TKVEGRGRRI RMPALCAARI FQLTRELGHK SDGETIQWLL QQAEPSIIAA TGTGTIPASA  120
LAAVAGSVSQ QGVSLSAGLQ QKLEELGGGG SSRASWGNLG RPHLAAAAAA AAAAAATATA  180
VWPSSVSGFG FQSSTTAGVA QSATNLANET SNYFHKLGFP AFDLPPTNMG PMSFTSILGA  240
NAQQLPGLEL GLSQDPHIGA INPQALNQFY QQMGQARVHH HHQQHQQPPA KDDSQDSGER  300
EREREIFTWF APPPPVNGNL SSSSSHARCD YLQLRAAWLE LNFIFLFVSL FKRRVDHVRQ  360
FYFFSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	4e-66	TCP family protein