PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989402.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CO-like

Protein Properties

Length: 413aa MW: 45393.6 Da PI: 5.3195

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989402.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.1	5.7e-06	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 +C+ +++++ + +C++++ lC +C + H+ XP_022989402.1 4 ICDFCGHQRSTVYCRSDSAALCLSCDRNVHS 34 7**************************9995 PP
2	CCT	60.8	4.6e-21	356	399	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a++RYkeK+k RkFeKk+rY+sRK++A+ R RvKGrFvk+ XP_022989402.1 356 RSDAVMRYKEKKKARKFEKKVRYASRKERADIRRRVKGRFVKAG 399 889**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MGYICDFCGH QRSTVYCRSD SAALCLSCDR NVHSANALSR RHLRALLCDR CHSQAAFVRY 60 PEENISLCQN CDYMGHSSSA SISSRKRQPI NCFSGCPTAA ELSSIWSFVL DLPSVGDACE 120 QELGLMSIAE NSAVNDWGPD DQAGQNVSGA DQTNEFSNED RSIWYGSSSM PQYPSKPHVM 180 DQPMRINATS PKLHCAGTKG PGLDIEDDLY ENLNMDEDSW NLENYDELFG VSLSFSEELL 240 ENGGIDSLFR MKSLSATKSG CPGVPAAEGA FVGLVNNTMR PASSNAASAD SMMSAKTEPI 300 LCYNNKQEHS SLSFSGMTGE SSAGEPQDCG ASPMLLMGEP PCCSMATESS FQSSNRSDAV 360 MRYKEKKKAR KFEKKVRYAS RKERADIRRR VKGRFVKAGE AYDYDPLNQT RSY

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MGYICDFCGH QRSTVYCRSD SAALCLSCDR NVHSANALSR RHLRALLCDR CHSQAAFVRY  60
PEENISLCQN CDYMGHSSSA SISSRKRQPI NCFSGCPTAA ELSSIWSFVL DLPSVGDACE  120
QELGLMSIAE NSAVNDWGPD DQAGQNVSGA DQTNEFSNED RSIWYGSSSM PQYPSKPHVM  180
DQPMRINATS PKLHCAGTKG PGLDIEDDLY ENLNMDEDSW NLENYDELFG VSLSFSEELL  240
ENGGIDSLFR MKSLSATKSG CPGVPAAEGA FVGLVNNTMR PASSNAASAD SMMSAKTEPI  300
LCYNNKQEHS SLSFSGMTGE SSAGEPQDCG ASPMLLMGEP PCCSMATESS FQSSNRSDAV  360
MRYKEKKKAR KFEKKVRYAS RKERADIRRR VKGRFVKAGE AYDYDPLNQT RSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-114	CO-like family protein