PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989335.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 361aa MW: 39026.4 Da PI: 10.5837

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989335.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.5	1.8e-14	110	155	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+eE+ ++ + k+lG+g+W+ I++ + ++Rt+ q+ s+ qky XP_022989335.1 110 KPWTEEEHRTFLAGLKKLGKGDWRGISKNFVTTRTPTQVASHAQKY 155 58*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MVRESPRKCS HCGLNGHNSR TCSNFAKGNN NNNYCVKLFG VNLMDNGDES MRKSLSMGNL 60 NIHVCNHNAA AAGNNVACYN AAVGDEGGYL SDGLIHNKKR KAALERKKGK PWTEEEHRTF 120 LAGLKKLGKG DWRGISKNFV TTRTPTQVAS HAQKYFLRKM NANDKKKRRA SLFDIPEIKN 180 NVSQECQASS SSMRANGETS QILLPKNSSE NQQQVSNLPT QLINRFPHLC LDTPHFVPST 240 TGSPASGVAN LHGIPYVVGV SPNNVPIIPL VNLGRRSSAV MAMPKSPIRT SSPNAAALVA 300 HPSGIPPSPR SSPQRPLMMQ LQASAMAASF ETDALELKIG LPQSPQAKNL SSQTSGAIRV 360 I

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MVRESPRKCS HCGLNGHNSR TCSNFAKGNN NNNYCVKLFG VNLMDNGDES MRKSLSMGNL  60
NIHVCNHNAA AAGNNVACYN AAVGDEGGYL SDGLIHNKKR KAALERKKGK PWTEEEHRTF  120
LAGLKKLGKG DWRGISKNFV TTRTPTQVAS HAQKYFLRKM NANDKKKRRA SLFDIPEIKN  180
NVSQECQASS SSMRANGETS QILLPKNSSE NQQQVSNLPT QLINRFPHLC LDTPHFVPST  240
TGSPASGVAN LHGIPYVVGV SPNNVPIIPL VNLGRRSSAV MAMPKSPIRT SSPNAAALVA  300
HPSGIPPSPR SSPQRPLMMQ LQASAMAASF ETDALELKIG LPQSPQAKNL SSQTSGAIRV  360
I

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	169	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	3e-60	MYB_related family protein