PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022989140.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 633aa MW: 71516.9 Da PI: 4.7612

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022989140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	374	417	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +Er+RR+++N+++ +Lr l+Pk + K++Ka+iL A++++k+Lq XP_022989140.1 374 VAERKRRKKLNERLYNLRALVPKiS------KMDKASILGDAIDFVKELQ 417 68*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MLFLTIFCLL SMNAGDINHS IVIMQTLMER LRPLVGSKSW DYCVLWKLSQ DQRCIEWVDC 60 CCAGTENNQN GGEEHVFPCR DTLSPHPRAS SCDLLAQLPC SVPLNSGVYI QTLLSNEPRW 120 LLFSNGTDST ALEETMGTRV LIPFPFGLVE LFVAKHASED QHVIDFVTTQ CSISIEQGAI 180 INSSNMDTSF SVDVNATNEI QSKPFVADQN VVIEDPENQF EAPGSTAPTL ENANVGYEIS 240 LDRIRLCSSP MNFLQQFNYS SENRNKNEIF HECSQDAFHT DKQGNPYKFS AENEFQEVDI 300 MQGSLMNNTS NIHMQFKENT ECKEQQGEEK DLVKNENGRS DSVSDCSDQI DDEDDAVAKY 360 RRRTGQGPQS KNLVAERKRR KKLNERLYNL RALVPKISKM DKASILGDAI DFVKELQKQV 420 KELQDELEEH SDDENGKIVG TGNDGNKTSV QLPEFLSQND KAQNSYHIGV LGSGSLLKQN 480 HQDTEGTNND KTQQMEPQVE VAQIDGNEFF VKVFCENKRG GFMRLMEALN ALGLEVTNAN 540 VTSYRGLVSN VFKVGKKDSE LVQADDVRDS LLEITKYPCR GWSEMVKQPE CSVSRMDYQT 600 HPHTHQHQHQ HQIQIQHPFL DKAINSRLHL LDD

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MLFLTIFCLL SMNAGDINHS IVIMQTLMER LRPLVGSKSW DYCVLWKLSQ DQRCIEWVDC  60
CCAGTENNQN GGEEHVFPCR DTLSPHPRAS SCDLLAQLPC SVPLNSGVYI QTLLSNEPRW  120
LLFSNGTDST ALEETMGTRV LIPFPFGLVE LFVAKHASED QHVIDFVTTQ CSISIEQGAI  180
INSSNMDTSF SVDVNATNEI QSKPFVADQN VVIEDPENQF EAPGSTAPTL ENANVGYEIS  240
LDRIRLCSSP MNFLQQFNYS SENRNKNEIF HECSQDAFHT DKQGNPYKFS AENEFQEVDI  300
MQGSLMNNTS NIHMQFKENT ECKEQQGEEK DLVKNENGRS DSVSDCSDQI DDEDDAVAKY  360
RRRTGQGPQS KNLVAERKRR KKLNERLYNL RALVPKISKM DKASILGDAI DFVKELQKQV  420
KELQDELEEH SDDENGKIVG TGNDGNKTSV QLPEFLSQND KAQNSYHIGV LGSGSLLKQN  480
HQDTEGTNND KTQQMEPQVE VAQIDGNEFF VKVFCENKRG GFMRLMEALN ALGLEVTNAN  540
VTSYRGLVSN VFKVGKKDSE LVQADDVRDS LLEITKYPCR GWSEMVKQPE CSVSRMDYQT  600
HPHTHQHQHQ HQIQIQHPFL DKAINSRLHL LDD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	361	382	RRRTGQGPQSKNLVAERKRRKK
2	376	383	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-128	bHLH family protein