PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988799.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 416aa MW: 47066.7 Da PI: 8.7062

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.3e-12	246	292	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022988799.1 246 DHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 292 5899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDSKVIIIHD FIGSHFFFKP FKTFFHSIPK SNSPPRENPR ATVHKPSHWQ VNNKASKRLL 60 HVSSLPLLSL ADWFEEVCFG EEEALWMEIS SMMGFSEVGM EDSGFVNQWH KSSIDEISTL 120 PLAAAFGENL QHSYAHTNLD QKASSNHSQN AIFGYAKHLS SFQTANHSPN SHVVEYPTTS 180 VSASNYTNQM DFTRPKEEVV CPQSISNIPS DMLSFQGSLC HQSHLTKSDR GAKRTAIKSR 240 LPLAQDHILA ERKRREKLSQ RFIALSAIVP GLKKMDKASV LGDAIKYLKQ LQEKVKILEE 300 QTRRKDIESV VFVKKSRVFG DGNNTSKMED EPLPEIEARS CDKNILIRIH CVKNKDVIEK 360 TIAEIEKLHL TIVNSSVMSF GSLALDITII AQMDNEFRLS LKDLVKNLQS TLRSFQ

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDSKVIIIHD FIGSHFFFKP FKTFFHSIPK SNSPPRENPR ATVHKPSHWQ VNNKASKRLL  60
HVSSLPLLSL ADWFEEVCFG EEEALWMEIS SMMGFSEVGM EDSGFVNQWH KSSIDEISTL  120
PLAAAFGENL QHSYAHTNLD QKASSNHSQN AIFGYAKHLS SFQTANHSPN SHVVEYPTTS  180
VSASNYTNQM DFTRPKEEVV CPQSISNIPS DMLSFQGSLC HQSHLTKSDR GAKRTAIKSR  240
LPLAQDHILA ERKRREKLSQ RFIALSAIVP GLKKMDKASV LGDAIKYLKQ LQEKVKILEE  300
QTRRKDIESV VFVKKSRVFG DGNNTSKMED EPLPEIEARS CDKNILIRIH CVKNKDVIEK  360
TIAEIEKLHL TIVNSSVMSF GSLALDITII AQMDNEFRLS LKDLVKNLQS TLRSFQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	256	ERKRRE
2	252	257	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-61	bHLH family protein