PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988621.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 744aa MW: 82007.6 Da PI: 5.7158

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.3	5.8e-32	259	315	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers d++++ei+Y+g H h XP_022988621.1 259 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSL-DGQITEIIYKGAHIHA 315 7**************************************.************97 PP
2	WRKY	103	1.7e-32	484	541	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vkg+++prsYY+CtsagC v+k+ver+++d k+v++tYeg+Hnhe XP_022988621.1 484 EDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCAVRKHVERASHDLKCVITTYEGKHNHE 541 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 744 aa Download sequence
MRFMDDNGEN SRSPTSSTSK FSDDEVLVDA NGGSLRASKR GRNGFNVSKN NLALPRFRTA 60 SPLGSPMVRS PCLTIPPGIS PTLLLDSPIT LLNTQDLPSP TTGTFPIHQI KDEHSLLNPV 120 MPEDGSSHGS EDSYFRFTPH GELNTLQSLF RLENQEADID RQAFESEKAL MDFEFLTDFS 180 KEGSVLKYDI ASSTGNNHFD GKSVNGNCDN MESCLSAIAH NQPSTPEESA KRDDSETQHP 240 LEGEQKGSCI PMGMLRTSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSLD 300 GQITEIIYKG AHIHAKPDPN RRAMLGSMLM PDDTPEIGEG GGNRAKVEAG LTWRNTQYGV 360 KDTKPISDWS VDGLERTSSI SVVTELSDPL LNPQGKNVGV FESVGTPELS STLASHDDDG 420 SGGGDDDDLT TQGSISVCIE ADDAEPELKR RRKEGGSIET NLASRSLREP RVVVQIETDV 480 DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCAVRKHV ERASHDLKCV ITTYEGKHNH 540 EVPAARNGSQ VNSSNGNSQP STSHVQPNMD LSRNSNVTNS ESQIQDLAAQ FYSKPEFNYD 600 YQRSGCFDTF RNDIKLGAPS FCQMKFPQLR HTLPYSSFGL NSKHTSTSIS SSLASVVPDF 660 PISLPLNQNF SAAGFDFTNG RSIPPFQVFL SGQQLRETDR FLTPKQEHDD DNIRASFQPI 720 VDSSSGSSSS LVSSVYQHIM GNFP

Sequence ? help Back to Top

Protein Sequence Length: 744 aa Download sequence

MRFMDDNGEN SRSPTSSTSK FSDDEVLVDA NGGSLRASKR GRNGFNVSKN NLALPRFRTA  60
SPLGSPMVRS PCLTIPPGIS PTLLLDSPIT LLNTQDLPSP TTGTFPIHQI KDEHSLLNPV  120
MPEDGSSHGS EDSYFRFTPH GELNTLQSLF RLENQEADID RQAFESEKAL MDFEFLTDFS  180
KEGSVLKYDI ASSTGNNHFD GKSVNGNCDN MESCLSAIAH NQPSTPEESA KRDDSETQHP  240
LEGEQKGSCI PMGMLRTSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCQ VKKKVERSLD  300
GQITEIIYKG AHIHAKPDPN RRAMLGSMLM PDDTPEIGEG GGNRAKVEAG LTWRNTQYGV  360
KDTKPISDWS VDGLERTSSI SVVTELSDPL LNPQGKNVGV FESVGTPELS STLASHDDDG  420
SGGGDDDDLT TQGSISVCIE ADDAEPELKR RRKEGGSIET NLASRSLREP RVVVQIETDV  480
DILEDGYRWR KYGQKVVKGN PNPRSYYKCT SAGCAVRKHV ERASHDLKCV ITTYEGKHNH  540
EVPAARNGSQ VNSSNGNSQP STSHVQPNMD LSRNSNVTNS ESQIQDLAAQ FYSKPEFNYD  600
YQRSGCFDTF RNDIKLGAPS FCQMKFPQLR HTLPYSSFGL NSKHTSTSIS SSLASVVPDF  660
PISLPLNQNF SAAGFDFTNG RSIPPFQVFL SGQQLRETDR FLTPKQEHDD DNIRASFQPI  720
VDSSSGSSSS LVSSVYQHIM GNFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-93	WRKY family protein