PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988583.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 419aa MW: 43956.2 Da PI: 6.9193

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.7e-12	218	263	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_022988583.1 218 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 263 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MQPCSREMQT FNSLLNHSQI SLQDLHADAP HHLNPPPPQI PASQLHHFDP AAAASHDDFL 60 EQMLNTIPSC SWPDLNPSNP KSPWDLNPIN KPSRDISDDH HQNHIAATSP AAKAAVMLQQ 120 QLLLNRGISV SAGNGVADHG LPPMPLSLGN ADLDRSQNDV VEGSCFRTPN SGGSIQSHSF 180 GAPGNGLSQT PAGGSVGVSP SQPKQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV 240 PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV APLVADVSSE GGGECMQGSG 300 AQGGRNSNNG GGGGNQTASS NDSMTVTEQQ VAKLMEKDMG SAMQYLQGKG LCLMPISLAT 360 AISTSTCHTR NPMMNGGGQH PVMGTNGDGP TSPSMSVLTV QSTSMGNGSV KDAASVSKP

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MQPCSREMQT FNSLLNHSQI SLQDLHADAP HHLNPPPPQI PASQLHHFDP AAAASHDDFL  60
EQMLNTIPSC SWPDLNPSNP KSPWDLNPIN KPSRDISDDH HQNHIAATSP AAKAAVMLQQ  120
QLLLNRGISV SAGNGVADHG LPPMPLSLGN ADLDRSQNDV VEGSCFRTPN SGGSIQSHSF  180
GAPGNGLSQT PAGGSVGVSP SQPKQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV  240
PNANKTDKAS MLDEIIDYVK FLQLQVKVLS MSRLGGAAAV APLVADVSSE GGGECMQGSG  300
AQGGRNSNNG GGGGNQTASS NDSMTVTEQQ VAKLMEKDMG SAMQYLQGKG LCLMPISLAT  360
AISTSTCHTR NPMMNGGGQH PVMGTNGDGP TSPSMSVLTV QSTSMGNGSV KDAASVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	228	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	1e-65	bHLH family protein