PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022988526.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 320aa MW: 36169.9 Da PI: 8.6064

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022988526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.4	1.9e-11	137	180	7	55
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + ErrRRdriN+++ L++l+P++ K + a+ L +++Y+k+L+ XP_022988526.1 137 QSERRRRDRINQKLKDLQKLVPNR-----SKTDRASLLDDTIQYLKQLK 180 68*******************8.....6***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MNQWIVPKWN QPQQHEDVSR SSHVHFPHKN TTFSHNLVPM AVDGHGEVLL QMASTKHSWG 60 QSEDTLESIV HSSLLRKRTR SNPEGKDETF MSGAFLESHR SFKAKNSIED LAPDDGSEDE 120 HNTKRKTSGS CSIRRTQSER RRRDRINQKL KDLQKLVPNR SKTDRASLLD DTIQYLKQLK 180 AQVQFMCSIR SDVPQMIVPL GMQQQQQQQL QVSLLAARMG LLDTASMASS SSSFPCAAAC 240 SPTLLPSIIS STKPKSKLST AAFVPPTDPF CTFLAQSMDM DLYSKMVTLY CQEVNRTPRQ 300 TSRLMESQFV EGIEEDMHQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	143	KRKTSGSCSIRRTQSERRRR
2	139	144	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61270.2	1e-15	bHLH family protein