PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 276aa MW: 29954.4 Da PI: 7.5988 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.9 | 9.8e-10 | 157 | 204 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022988404.1 157 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYVQSLQ 204 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MDLPLVNESS FSAANPSAYS LAAIWPFGGE QGGNALGLRM ASLSQNLGGF PESSTNRDGS 60 MEESTVTEQS GGGRKRKDVS SEDESSRMVS TSSANQLSNS NGKRTKVVAS RDEGGGIKAE 120 VEPSSADGKK LAEQSRKPEP PKDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV 180 PGCNKVIGKA LVLDEIINYV QSLQRQVELL SMKLEAVNSR MNLSPAIEGF TAKNMVNQPY 240 DTVGILYGSQ AARDYTQGAQ PEWLHMQISG SFERTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 4e-90 | bHLH family protein |