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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022988122.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 424aa MW: 47604.9 Da PI: 6.4522 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 395.9 | 4.3e-121 | 46 | 424 | 1 | 341 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lLl+cA++v+ g+le a+ +L ++s+l s dgd+mqR+ ayf++ALa r+++++++lyka+++++ + +see+ + klf+e++P+lk+++ XP_022988122.1 46 LIHLLLTCANHVAVGSLESANLALDQISHLTSADGDTMQRIGAYFAKALADRILKTWPGLYKAFNSTKIP--MVSEEILVKKLFFETFPFLKVAF 138 689*************************************************************999998..69********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +++NqaI+ea+ege++vHiiD++ ++ ++W+aL+q L++Rpegpp+lRiTgv++ +ke l +++ rL+++Ae+l++pf+fn v +rledl+ XP_022988122.1 139 VLTNQAIVEAMEGEKMVHIIDLNGNETTHWLALMQVLSARPEGPPHLRITGVHP----QKEILDQMAPRLTEVAEKLDIPFQFNS-VISRLEDLD 228 ******************************************************....9**************************.79******* PP GRAS 191 leeLrvkpgEalaVnlvlqlhrll..............................................desvsleserdevLklvkslsPkvv 239 +e+Lrvk+gEala+n+vlqlh+ll ++s++ + +++++L+ ++sl Pkv+ XP_022988122.1 229 IEKLRVKTGEALAINSVLQLHTLLgsdevlqkpsssaaksanvvqysryslselldkdlvngcnpspdsvSSSANAT-KINRFLDGLWSLTPKVM 322 ******************************************************************98754444444.5999************* PP GRAS 240 vvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaa 334 +v+eq+++hn+++++er+leal++y+a+fd+le++++r+s er k+E++l+g+ei+n+++cegaer+erhe+ +kW +r++ aGF+ v+ls++ + XP_022988122.1 323 IVTEQDSNHNGSTLMERLLEALHTYAAIFDCLESNMSRTSVERLKLEKMLFGEEIKNIITCEGAERKERHEKHKKWCQRFDIAGFRHVSLSYYGM 417 *********************************************************************************************** PP GRAS 335 kqaklll 341 qa++ll XP_022988122.1 418 VQAQSLL 424 ****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence |
MIQDEGISTI TSTPLQFFTM MPLSPKLGSP YLWLRELKSE ERGLYLIHLL LTCANHVAVG 60 SLESANLALD QISHLTSADG DTMQRIGAYF AKALADRILK TWPGLYKAFN STKIPMVSEE 120 ILVKKLFFET FPFLKVAFVL TNQAIVEAME GEKMVHIIDL NGNETTHWLA LMQVLSARPE 180 GPPHLRITGV HPQKEILDQM APRLTEVAEK LDIPFQFNSV ISRLEDLDIE KLRVKTGEAL 240 AINSVLQLHT LLGSDEVLQK PSSSAAKSAN VVQYSRYSLS ELLDKDLVNG CNPSPDSVSS 300 SANATKINRF LDGLWSLTPK VMIVTEQDSN HNGSTLMERL LEALHTYAAI FDCLESNMSR 360 TSVERLKLEK MLFGEEIKNI ITCEGAERKE RHEKHKKWCQ RFDIAGFRHV SLSYYGMVQA 420 QSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G50420.1 | 0.0 | GRAS family protein |