PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022988068.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 539aa    MW: 62265.6 Da    PI: 7.6191
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022988068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix44.63.9e-14117179168
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                     +W+++e laL+++r+++++ + ++      We+vs+k+ e gf+r++ +Ckek+e+  +++  i+ + 
  XP_022988068.1 117 QWSNDELLALLTIRSNIDNCFHES-----TWEHVSRKLGEVGFRRTADKCKEKFEEETRYFNHINYHP 179
                     7******************99998.....9*******************************9988665 PP
2trihelix92.63.9e-29420507186
        trihelix   1 rWtkqevlaLiearremeerlrr...gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+++evlaL+++r ++  +  +   ++ k+plWe++s+ m + g++rs+k+Ckekwen+nk+++k+k+ +kkr s +s+tcpyf+ql 
  XP_022988068.1 420 RWPRDEVLALVNVRCSLYGNGVSdrdQSGKAPLWERISQGMLQMGYKRSAKRCKEKWENINKYFRKTKDVNKKR-SLDSRTCPYFHQLS 507
                     8*************9877666531225799*******************************************8.9999********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MFEGSVSEQL HQFLTPRTPP PQPPPPSPPP PPPPPNPNSL PLPLNFALHS PNFNFHPFDS  60
YNSTTTHQIY LHHDLFHQKD DETRTTTTGN LQVAMDLDVG RSILMDDHHH HHHHHRQWSN  120
DELLALLTIR SNIDNCFHES TWEHVSRKLG EVGFRRTADK CKEKFEEETR YFNHINYHPH  180
HPNQDRDRDR DHLPLIHIEN GKPDDGKADV VVPEVQEVQE GSKNDETIAS KKRKRKTKTN  240
TKFELLKGYC EEIVKNMMIQ QEEIHSKLLD DMLKREEEKI AKEECWKKQQ MERLHKELEV  300
MAYEQAIASD RQATIIQILN QITNSSTFSS SNSQKELQNL LKTLNYNHNN VPNSPSSSSL  360
IQTHSSPNKE HPQIDPKNPK NPCLSTQILA PQDPNSLINH SNPPPSSPTS PKPRDDLGKR  420
WPRDEVLALV NVRCSLYGNG VSDRDQSGKA PLWERISQGM LQMGYKRSAK RCKEKWENIN  480
KYFRKTKDVN KKRSLDSRTC PYFHQLSTLY NQEGGNQHPG KCSIVSLENR SNQTEIVEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231236KKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.15e-71Trihelix family protein