PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022987951.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 772aa MW: 85527.3 Da PI: 8.3215

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022987951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	68.9	1e-21	680	760	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e+++Li++r ++++r++ +k +++lWee+s m + g++rsp qCk+ w +l +++++ ++e+k s+++pyfd++ XP_022987951.1 680 KWKPEEIKKLIQLRGKLHDRFQVAKGRMALWEEISTSMLADGINRSPGQCKSLWASLVVKFEQESKSENK-----SKSWPYFDEMS 760 7****************************************************************998.....678****95 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MLALCFPTMT SLVSKKLYLI PHLLEDGVTK LKLLLLHMAT KITLVIPALD SHTPIFASSF 60 TVELIKKRLK ENGIFIPSRL KVFKMKRRFT AGPFEIEPIR VTHSIPDCCG LVLRCADGTI 120 FHTGDWKIDE SPLDGKVFDR ETLEQLSKEG VTLMMSDSTN VLSPGRTISE SVVADALLRR 180 ISAAKGRVIT TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAWK DGKAPIDPST 240 LVKVEDIDAY APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLSKEDMIL YSAKVIPGNE 300 SRVMKMLNRI SEIGSNIIMG KNELLHTSGH GYRGELEEVL QIVKPQHFLP IHGELLFLKE 360 HELLGRSTGI RHTTVIKNGE MLGVSHLRNR RVLSNGFTSL GMENLQLKYS DGDKAFGSSS 420 ELFVDERLKI ATDGIIVVSM EILRPQSVDG LNETGIRGKL RITTRCLWLD KGKLLDALHK 480 AAHAALSSCP VNCPLPHMER TVSELLRKMV RKYSGKRPEV IVMAVENPGG VLTEELGTRL 540 SGKSNTGIGI SAFRKAVDGQ PTKSHLNSIK PNGNDDFHSE DNSSQESQGF CIKPERLLPE 600 EDYIPSNSTE MNSFDNEGLE DFWRPFITPT SPANELAKDN EGSVQQSKNT LEITNEGEEV 660 SDDKSLKTSN SDVKPVKRNK WKPEEIKKLI QLRGKLHDRF QVAKGRMALW EEISTSMLAD 720 GINRSPGQCK SLWASLVVKF EQESKSENKS KSWPYFDEMS GILSGSEDVA TE

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MLALCFPTMT SLVSKKLYLI PHLLEDGVTK LKLLLLHMAT KITLVIPALD SHTPIFASSF  60
TVELIKKRLK ENGIFIPSRL KVFKMKRRFT AGPFEIEPIR VTHSIPDCCG LVLRCADGTI  120
FHTGDWKIDE SPLDGKVFDR ETLEQLSKEG VTLMMSDSTN VLSPGRTISE SVVADALLRR  180
ISAAKGRVIT TQFASNIHRL GSVKAAADLT GRKLVFVGMS LRTYLDAAWK DGKAPIDPST  240
LVKVEDIDAY APKDLLIVTT GSQAEPRAAL NLASYGSSHS LKLSKEDMIL YSAKVIPGNE  300
SRVMKMLNRI SEIGSNIIMG KNELLHTSGH GYRGELEEVL QIVKPQHFLP IHGELLFLKE  360
HELLGRSTGI RHTTVIKNGE MLGVSHLRNR RVLSNGFTSL GMENLQLKYS DGDKAFGSSS  420
ELFVDERLKI ATDGIIVVSM EILRPQSVDG LNETGIRGKL RITTRCLWLD KGKLLDALHK  480
AAHAALSSCP VNCPLPHMER TVSELLRKMV RKYSGKRPEV IVMAVENPGG VLTEELGTRL  540
SGKSNTGIGI SAFRKAVDGQ PTKSHLNSIK PNGNDDFHSE DNSSQESQGF CIKPERLLPE  600
EDYIPSNSTE MNSFDNEGLE DFWRPFITPT SPANELAKDN EGSVQQSKNT LEITNEGEEV  660
SDDKSLKTSN SDVKPVKRNK WKPEEIKKLI QLRGKLHDRF QVAKGRMALW EEISTSMLAD  720
GINRSPGQCK SLWASLVVKF EQESKSENKS KSWPYFDEMS GILSGSEDVA TE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein