PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022987811.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 295aa    MW: 31793.1 Da    PI: 10.5624
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022987811.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.22.6e-19155188134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  XP_022987811.1 155 CSECNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 188
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSHLLTPRPS SPSPLRPILL PSLPSALSSA MAPPYHDDLL RRSSSHHLFF PTTTATSSSS  60
SSSSSSSLSF PAPDHSNSDD PRRLQLKHES ESSSCCENHN THNDLVNWSS SSKIRLLINS  120
NQINTATQMI DGARNSHDLN RTTMLNDGAA IIRTCSECNT TKTPLWRSGP RGPKSLCNAC  180
GIRQRKARRA MAEAAAVNGG VPCGGKSAAI ILKTNKAVQH KIMTKPAAKK LKRKRKDDVV  240
VAAGGGGGGK KGCFEDIKIG RRLSEISSSY QRVFPQDERE AAILLMTLSY GLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.13e-16GATA family protein