PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022986905.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 298aa    MW: 33247.1 Da    PI: 9.7963
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022986905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.55.6e-072570245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      rWT  E +l+ +a + + ++   +W ++a++++ g+t  +++  + 
   XP_022986905.1 25 SRWTIAENKLFENALAIFDTDtpdRWQKVAAMIP-GKTVGDVIRQYK 70
                     69********************************.****99998876 PP
2Myb_DNA-binding48.22.4e-15132176347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022986905.1 132 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 176
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MKWEMEILSP PVSSMSWSSG DGLSSRWTIA ENKLFENALA IFDTDTPDRW QKVAAMIPGK  60
TVGDVIRQYK ELEADVSSIE AGLIPIPGYD TSQFTLDWVS SHSYDGFKQS YGLIGKRSSG  120
RTADQERKKG VPWTEEEHKL FLMGLKKYGK GDWRNISRNF VVTRTPTQVA SHAQKYFIRQ  180
LSGGKDKRRA SIHDITTVNL NDTRSPSPEN KKSLSPDHAG VLSRHSNPSS TVPRNPFNWN  240
HHHHQQQQHN AGGAAMVFNH SHGNVFMSPG TFGVNSYVGV HLPDHNLQKD SVLGGQGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-100MYB_related family protein