PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022986834.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 556aa MW: 63029.5 Da PI: 6.105

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022986834.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.1	2.6e-10	505	553	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 ++W+ E++ l av+++G+g+Wk+I + Rt+ ++k++w++ XP_022986834.1 505 KKWSLLEEDTLRTAVQRFGKGNWKLILNSYRdifDERTEVDLKDKWRNM 553 58******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MNEDICRWIT EFILRSSMDD HLLKRVLAVI PLSNKDFRLK KTVLLRAIES EISEAVITDK 60 LLEIFEMIEQ LEKAEGLQIM ESMKAAYCAV AVECTVKYLL VEGVYKHGRY FDAVRRIWRG 120 GVTKTELVSD EFKAWKDEVE ASLCDANIRK KLVHMNTRYD ALKLIGDYLG ESWAAIGPSF 180 LQLSASLVDK KMRNEMHSIQ LERETNILAI ESVDVGGSGG IELPSQRENC VKTEWQGSGR 240 VLSQPESRRT DLLHSHQDLG TNDGSKQSAI DAMNTERVQE LATETAEGQE SAEKEVAVLQ 300 NASSCREILK TSVLPRCKSL AFHRRVSGGV KISHLEDLEK ENEDESSSER YNCLETPEVN 360 RVREALKTSS LELQAVAKDP LPDALRIAES VAHDLAEKNK TCENSLEDRN DAGVDNPTIN 420 KEAVPLQPMS ANLKDPGHGH KTVFPRPSIM ERNSTACTYE WNDSIDDLPE GSPASRLHLH 480 SPKRKAVSPL KKYEETKAVG RRRCKKWSLL EEDTLRTAVQ RFGKGNWKLI LNSYRDIFDE 540 RTEVDLKDKW RNMTRY

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MNEDICRWIT EFILRSSMDD HLLKRVLAVI PLSNKDFRLK KTVLLRAIES EISEAVITDK  60
LLEIFEMIEQ LEKAEGLQIM ESMKAAYCAV AVECTVKYLL VEGVYKHGRY FDAVRRIWRG  120
GVTKTELVSD EFKAWKDEVE ASLCDANIRK KLVHMNTRYD ALKLIGDYLG ESWAAIGPSF  180
LQLSASLVDK KMRNEMHSIQ LERETNILAI ESVDVGGSGG IELPSQRENC VKTEWQGSGR  240
VLSQPESRRT DLLHSHQDLG TNDGSKQSAI DAMNTERVQE LATETAEGQE SAEKEVAVLQ  300
NASSCREILK TSVLPRCKSL AFHRRVSGGV KISHLEDLEK ENEDESSSER YNCLETPEVN  360
RVREALKTSS LELQAVAKDP LPDALRIAES VAHDLAEKNK TCENSLEDRN DAGVDNPTIN  420
KEAVPLQPMS ANLKDPGHGH KTVFPRPSIM ERNSTACTYE WNDSIDDLPE GSPASRLHLH  480
SPKRKAVSPL KKYEETKAVG RRRCKKWSLL EEDTLRTAVQ RFGKGNWKLI LNSYRDIFDE  540
RTEVDLKDKW RNMTRY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-18	MYB_related family protein