PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985884.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

YABBY

Protein Properties

Length: 192aa MW: 21652.9 Da PI: 8.5872

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985884.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	131.1	1.4e-40	12	146	25	165
YABBY 25 svPstslfkvvtvrCGhCtsllsvnlakas.qllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprvpp.vir 117 vP +sl++ vtv CGhC+sllsvn+ a+ l s l+++l +e e+ ++ k ++ +s+ + s ++ e+ +p +pp v++ XP_022985884.1 12 CVPCSSLSMEVTVTCGHCSSLLSVNMLRATlVPLHFLSSLSRNLPKETCREM----SSGKLFDSFIRSNLKF-SEYE---VEEGLIPVTPPsVNK 98 69*******************99876652223344444444443333333....3333333222222222.2222...233345555555* PP YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPk 165 PPekrqrvPsayn+fik+ei+r+ka+nP+++h+eaf +aaknWa fP+ XP_022985884.1 99 PPEKRQRVPSAYNCFIKDEIRRLKAENPQMTHKEAFRTAAKNWANFPP 146 **********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MCNVESVPPF CCVPCSSLSM EVTVTCGHCS SLLSVNMLRA TLVPLHFLSS LSRNLPKETC 60 REMSSGKLFD SFIRSNLKFS EYEVEEGLIP VTPPSVNKPP EKRQRVPSAY NCFIKDEIRR 120 LKAENPQMTH KEAFRTAAKN WANFPPTIQQ KEDPQNTQIP EVKTPSLRSE VMISNQLFKP 180 ITPNGKQNTN HS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	2e-37	YABBY family protein