PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985474.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 554aa MW: 59229.4 Da PI: 9.2577

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	60	82	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022985474.1 60 FICEVCNKGFQREQNLQLHRRGH 82 89*******************88 PP
2	zf-C2H2	12.6	0.00042	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022985474.1 136 WKCDKCSKRYAVQSDWKAHSKTC 158 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MAASSSSSLP VYGVGEEATP QMRPPSNSST KKKRNQPGTP NPDAEVIALS PKTLMATNRF 60 ICEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KSTKDPKRKV YLCPEPTCVH HHPSRALGDL 120 TGIKKHYSRK HGEKKWKCDK CSKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH 180 RAFCDALAQE SARHPPSIGR HLYGAQDHPN IINQSAPGHF THLLPSSMGS SFRPMSASGF 240 FLTEQNNQSS FHDDQPNQSQ QGFFGNKGFH GVMQFPEIQS HTNNCATNVF NLGFIPNSTA 300 DGTTNLNNNN DTNSNSTNLN QFSATNNGNN EAAASNIFAV IGDQMSSAAL PSLYSNALGV 360 GGGGGSGIGG SFPHMSATAL LQKAAQLGST TSSSNTTSTL LRSFGSSSNS GGKASDRTLF 420 PLSYGGVTFG EHESNLQDMM NSFESGSSGS GMFGSGMNSF GGLECSSSRS NMETLEDPKL 480 QQDVRGVRMG GTDRLTRDFL GVGQIVRRMS GGGGGGGGGG YSQKQGAEGI VLEGNERNSA 540 PSSQGFGGGN GNYQ

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MAASSSSSLP VYGVGEEATP QMRPPSNSST KKKRNQPGTP NPDAEVIALS PKTLMATNRF  60
ICEVCNKGFQ REQNLQLHRR GHNLPWKLKQ KSTKDPKRKV YLCPEPTCVH HHPSRALGDL  120
TGIKKHYSRK HGEKKWKCDK CSKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH  180
RAFCDALAQE SARHPPSIGR HLYGAQDHPN IINQSAPGHF THLLPSSMGS SFRPMSASGF  240
FLTEQNNQSS FHDDQPNQSQ QGFFGNKGFH GVMQFPEIQS HTNNCATNVF NLGFIPNSTA  300
DGTTNLNNNN DTNSNSTNLN QFSATNNGNN EAAASNIFAV IGDQMSSAAL PSLYSNALGV  360
GGGGGSGIGG SFPHMSATAL LQKAAQLGST TSSSNTTSTL LRSFGSSSNS GGKASDRTLF  420
PLSYGGVTFG EHESNLQDMM NSFESGSSGS GMFGSGMNSF GGLECSSSRS NMETLEDPKL  480
QQDVRGVRMG GTDRLTRDFL GVGQIVRRMS GGGGGGGGGG YSQKQGAEGI VLEGNERNSA  540
PSSQGFGGGN GNYQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-129	C2H2 family protein