PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022985260.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 240aa    MW: 26566.5 Da    PI: 8.8315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022985260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.8e-1185132454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL  +l +    + +K +Ka+iL  Av+ + +L
  XP_022985260.1  85 SKACREKLRRDRLNDKFLELGAILEPG---RPPKTDKAAILIDAVRIVAQL 132
                     6789**********************8...89*************999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MVSPETTNWL FDYALMDDIP VADANFSAPT AGFSWSMPPL NASSNVSTEI EGSLFESDGL  60
KEPGSKKRRT KFCRVRTETS CASSSKACRE KLRRDRLNDK FLELGAILEP GRPPKTDKAA  120
ILIDAVRIVA QLRGEAKMLK DSNTSLSEKI KELKAEKNEL RDEKQRLKME KEKLEQQLKD  180
MNSQPGFLPP AIPATFAAQG QAAGNKLVPF ISYPGVAMWQ FMPPAAVDTS QDHVLRPPVA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16671KKRRTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-95bHLH family protein