PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022985107.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 954aa MW: 106363 Da PI: 7.145

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022985107.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.2	1e-08	218	270	23	75
trihelix 23 rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 +gk ++ + +ev+++++++g++r +k+ kw+n+ ++++k+ e+e++++ e+ XP_022985107.1 218 SGKTRADKDREVAEYLQKHGVNRDAKTGGTKWDNMLGEFRKVHEWERGGEREQ 270 5678888899*************************************996555 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MAEKGEAPRQ QDYDSSSPKD PLDDSFETRP HGGGQHHHHH QLHRRHHPHH DSSLIVASPF 60 ISTPLYLPTA TATTTPFEAV NPKRTRFTAG QWKLLPSPSS SQLPIPVVGS DSSPSPSHRP 120 TGTATVAAAA SSSDTTSSPS YSPLPSTASG QPEPAGSKGE GESQNQAQYR KGKYVSPVWK 180 PNEMLWLARA WRIQYQGGGA DDVGIVGGQG GRGSGNGSGK TRADKDREVA EYLQKHGVNR 240 DAKTGGTKWD NMLGEFRKVH EWERGGEREQ LVGKSYFRLS PYERKLHRLP ASFDEQVFEE 300 LCQFMGSKMR TKPTPLLPLT RALPPPPPFS SRSKQVFGVG YASVDASGSP THSCSSKDIR 360 RIGKVRMVWE ESVSLWSEEA GEQLRGGRIK IEGCSFLNAE DLTFFDDSMV ACTMESYDHG 420 PLKGLSIDRF VSGQQIKVFG RRKPPTCATT GSHHGPPERL PLMHSTEPSA RSNTSWEYQD 480 PTEYYVGCLR VPPTSLPSLS ELSWHIQDPP SEELRLPIRK DVYAYLPQGK ELMFTTTTQM 540 LDCKSFIYEI LCPLIRTNPC ITTTSRDSFI GLWDDCINRL VCEFCCMEMR IIRKPNSPST 600 TTTNGLQDQW PNLTGFIRNF CLWRGEETDH IKDGQPHDLD PSNSIVEKLL WTYLDIPYLL 660 GYYAVGYLVT FCALSRGHDN RIIRTDLYSL DLSMPSERLK ALVPCYRIAG VLSLLADGCH 720 KLPIFSDFER IDNGKGIVTE MTPNLVTKIF SCRTKWTAVK EIYDFLDGRI PHSEFICGSS 780 DKDLAIVFKP RVCKLRPTSY EQLIEALKNV TKALVALHDL CFMHRNVCWE NVMKRTSDEE 840 EETTTGTGEW ILCGFEEAVG APQIYPYGEA SASGRHAPEM ERGLHGVKVD MWGVGFLIKT 900 CGLIGIPKML KELQNRCMDQ NPEHRLTAAD CYHHLLQLQS SLSTATGTPG GGLM

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MAEKGEAPRQ QDYDSSSPKD PLDDSFETRP HGGGQHHHHH QLHRRHHPHH DSSLIVASPF  60
ISTPLYLPTA TATTTPFEAV NPKRTRFTAG QWKLLPSPSS SQLPIPVVGS DSSPSPSHRP  120
TGTATVAAAA SSSDTTSSPS YSPLPSTASG QPEPAGSKGE GESQNQAQYR KGKYVSPVWK  180
PNEMLWLARA WRIQYQGGGA DDVGIVGGQG GRGSGNGSGK TRADKDREVA EYLQKHGVNR  240
DAKTGGTKWD NMLGEFRKVH EWERGGEREQ LVGKSYFRLS PYERKLHRLP ASFDEQVFEE  300
LCQFMGSKMR TKPTPLLPLT RALPPPPPFS SRSKQVFGVG YASVDASGSP THSCSSKDIR  360
RIGKVRMVWE ESVSLWSEEA GEQLRGGRIK IEGCSFLNAE DLTFFDDSMV ACTMESYDHG  420
PLKGLSIDRF VSGQQIKVFG RRKPPTCATT GSHHGPPERL PLMHSTEPSA RSNTSWEYQD  480
PTEYYVGCLR VPPTSLPSLS ELSWHIQDPP SEELRLPIRK DVYAYLPQGK ELMFTTTTQM  540
LDCKSFIYEI LCPLIRTNPC ITTTSRDSFI GLWDDCINRL VCEFCCMEMR IIRKPNSPST  600
TTTNGLQDQW PNLTGFIRNF CLWRGEETDH IKDGQPHDLD PSNSIVEKLL WTYLDIPYLL  660
GYYAVGYLVT FCALSRGHDN RIIRTDLYSL DLSMPSERLK ALVPCYRIAG VLSLLADGCH  720
KLPIFSDFER IDNGKGIVTE MTPNLVTKIF SCRTKWTAVK EIYDFLDGRI PHSEFICGSS  780
DKDLAIVFKP RVCKLRPTSY EQLIEALKNV TKALVALHDL CFMHRNVCWE NVMKRTSDEE  840
EETTTGTGEW ILCGFEEAVG APQIYPYGEA SASGRHAPEM ERGLHGVKVD MWGVGFLIKT  900
CGLIGIPKML KELQNRCMDQ NPEHRLTAAD CYHHLLQLQS SLSTATGTPG GGLM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-08	Trihelix family protein