PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984807.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 333aa MW: 36558.3 Da PI: 5.2342

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.7	5.6e-15	88	139	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ ++ Lr+l+P + kK + a+i +veYIk+Lq XP_022984807.1 88 QRMSHITVERNRRKQMNEHLSVLRSLMPCF---YVKKGDQASIIGGVVEYIKELQ 139 79*************************9...9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MVDNLADFFQ QNEEFVDHTT NPQLEGGYDL FSIFDTLENV AEFSMIEDDT ELETSPKTKR 60 LKVTAATSPT TAMAGVSSSE DANPDGAQRM SHITVERNRR KQMNEHLSVL RSLMPCFYVK 120 KGDQASIIGG VVEYIKELQQ VLQSLEAKKQ RKVYSEVLSP RVVVSSPRPF PMSPRKPPPL 180 SPRLNLPISP RTPQPTSPYS KPPRLQQPPT TDMANNNNST GEPSPCNSSS TTNSSIDNGN 240 NGNNDLVANS KSGIAEVEVK FTGPNVVLKT VSAPIPGQAV KIIAALEQLS LEILHVKITT 300 VDDTMFNSFT IKIGIECQLS AEELAHQIQQ TFC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	100	RMSHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53210.1	6e-45	bHLH family protein