PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984690.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 368aa MW: 42083.1 Da PI: 7.1534

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.8	2.6e-27	122	207	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r+ ++++++++++k+plW++vs+ m +e g++rs +Ckek++nl k+ykk+keg+ +r+ + +++++f+qlea XP_022984690.1 122 RWPRQETLTLLEIRSLLDSKFKESNQKGPLWDQVSRMMeEEYGYKRSGRKCKEKFDNLYKYYKKTKEGKTGRH--DGKHYRFFRQLEA 207 8***********************************7788************************985..5557*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MSDKYTHPDL RHLMANEPNF PAIPQTLDSF FHHHTHLTRG FSPLPPPSAL PKFQPIPLVL 60 TDPATFPSGQ LHFGCSDNST TTAGGGGAAS SAPFSRRNKA VDGEWRPYGN DAVGVSNGAN 120 SRWPRQETLT LLEIRSLLDS KFKESNQKGP LWDQVSRMME EEYGYKRSGR KCKEKFDNLY 180 KYYKKTKEGK TGRHDGKHYR FFRQLEAIYG DCNHQLSSPV TGGENHVEAG GISQSFSMSS 240 DFETSSSGNY HDDDLSAIAF MMNQRRVEKG REDDMSKGEG VGWREEVERM VDSKVRRLME 300 VQENWMEKIM ASIEDGEKER IVKEEEWRKK EVARFDREML EFCARERAWV RAREAAFMEI 360 INNFSGKG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MSDKYTHPDL RHLMANEPNF PAIPQTLDSF FHHHTHLTRG FSPLPPPSAL PKFQPIPLVL  60
TDPATFPSGQ LHFGCSDNST TTAGGGGAAS SAPFSRRNKA VDGEWRPYGN DAVGVSNGAN  120
SRWPRQETLT LLEIRSLLDS KFKESNQKGP LWDQVSRMME EEYGYKRSGR KCKEKFDNLY  180
KYYKKTKEGK TGRHDGKHYR FFRQLEAIYG DCNHQLSSPV TGGENHVEAG GISQSFSMSS  240
DFETSSSGNY HDDDLSAIAF MMNQRRVEKG REDDMSKGEG VGWREEVERM VDSKVRRLME  300
VQENWMEKIM ASIEDGEKER IVKEEEWRKK EVARFDREML EFCARERAWV RAREAAFMEI  360
INNFSGKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	4e-52	Trihelix family protein