PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022984570.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 213aa    MW: 24552.1 Da    PI: 9.5833
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022984570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.8e-133074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a++++  + Wk+I + +g  +t  q++s+ qky
   XP_022984570.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MALPFDTAAT SLRDDLLKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG  60
SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAARPY PQKTSTNGQV IENNCCSSTD  120
RTTRARFPTK SSVEEHNKLQ LRVLPDFGQV YNFIGSVFDP KASDHLQKLK QMDQIDVETV  180
MLLMRNLAIN LTVPDFEDHK KVLSSYDAFM EHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-83MYB_related family protein