PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022984176.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 928aa MW: 104233 Da PI: 6.8351

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022984176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	51.5	1.9e-16	13	55	76	118
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 g+v vl+cyYah+een++fqrr+yw+Lee+l++ivlvhylev+ XP_022984176.1 13 GSVYVLQCYYAHGEENENFQRRTYWMLEEDLSHIVLVHYLEVQ 55 67899***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 928 aa Download sequence
MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN 60 FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTDISL NSTQVSEYED 120 AESEYGNRES NVFHSFLGLQ RSNKESTSGE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK 180 DSNHAESIHE PHKNLCLSSD NVLKSGATGI YSPHLQPSFS TSRSKILDNV PKQGDEIMGL 240 PFSDRCKRED FGNHLLAQED CEAILEGKSK SKKQLLLNAV ATESLRKSDS FNQWMSRELR 300 DVKEASMQCN SGAHWNSVEN EVGNSSISSQ AHLDTYMFSR SLSHEQLFSI IDFSPSWAYE 360 GSEIKVLISG KFLKSQQEVE NLKWSCMFGE VEVPAEVIAN GVLRCFTPIH KAGKVPFYVT 420 RSNRLACSEV QNFEYRVKCI QDAEVMYDTS ITNEAFALRF VKLLCLSCSD TLIADPNSSS 480 DRSGFNKVRE LLKVDNSEWD QFMKPRWDEN VSLGSTKELL LQRLLKEKLH VWLLQKVREG 540 GRGPSVLDEH GLGVLHFAAA LNYDWALLPA VVAGINVNFR DANGWTALHW AAFFGRERTV 600 AALISLGAAP GALTDPNPKY PYGRTPAGLA SSNGHKGIAG YLAESALSAH LESLNFDNKK 660 SKAVDTCGEK AVHTASERVA TPHQGNDMHT LSLKDSLAAV SNATQAAARI HEVMRMQSFQ 720 KKQLLDLSNY QPLSLLLVKR RNSGSHDEHA AAIRIQNKFR SWKGRKDFLI IKQRIVKIQA 780 HVRGHQVRKN YRNIVWSVGI LEKVILRWRR KGSGLRGFKA EALSEDSSKQ NPSVTEDDDD 840 EFFKKGRKQT EERLQKALAR VKSMVQYPEA RDQYRRLLNV VTEMRQTKVK DGVVDKVDET 900 ADFDDLIDIE ALLDEDAFLP NASSNFSV

Sequence ? help Back to Top

Protein Sequence Length: 928 aa Download sequence

MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSSRAN  60
FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTDISL NSTQVSEYED  120
AESEYGNRES NVFHSFLGLQ RSNKESTSGE PCDPNYPAPL SENFTAFGGN GFPTSSDRSK  180
DSNHAESIHE PHKNLCLSSD NVLKSGATGI YSPHLQPSFS TSRSKILDNV PKQGDEIMGL  240
PFSDRCKRED FGNHLLAQED CEAILEGKSK SKKQLLLNAV ATESLRKSDS FNQWMSRELR  300
DVKEASMQCN SGAHWNSVEN EVGNSSISSQ AHLDTYMFSR SLSHEQLFSI IDFSPSWAYE  360
GSEIKVLISG KFLKSQQEVE NLKWSCMFGE VEVPAEVIAN GVLRCFTPIH KAGKVPFYVT  420
RSNRLACSEV QNFEYRVKCI QDAEVMYDTS ITNEAFALRF VKLLCLSCSD TLIADPNSSS  480
DRSGFNKVRE LLKVDNSEWD QFMKPRWDEN VSLGSTKELL LQRLLKEKLH VWLLQKVREG  540
GRGPSVLDEH GLGVLHFAAA LNYDWALLPA VVAGINVNFR DANGWTALHW AAFFGRERTV  600
AALISLGAAP GALTDPNPKY PYGRTPAGLA SSNGHKGIAG YLAESALSAH LESLNFDNKK  660
SKAVDTCGEK AVHTASERVA TPHQGNDMHT LSLKDSLAAV SNATQAAARI HEVMRMQSFQ  720
KKQLLDLSNY QPLSLLLVKR RNSGSHDEHA AAIRIQNKFR SWKGRKDFLI IKQRIVKIQA  780
HVRGHQVRKN YRNIVWSVGI LEKVILRWRR KGSGLRGFKA EALSEDSSKQ NPSVTEDDDD  840
EFFKKGRKQT EERLQKALAR VKSMVQYPEA RDQYRRLLNV VTEMRQTKVK DGVVDKVDET  900
ADFDDLIDIE ALLDEDAFLP NASSNFSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein