PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022983958.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 462aa    MW: 50923.3 Da    PI: 9.1829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022983958.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.3e-32197253360
                     -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                     DgynWrKYGqK+vkgs++prsYY+Ct+++Cpvkkkvers  d+k+ ei+Y+geH+h+k
  XP_022983958.1 197 DGYNWRKYGQKKVKGSKYPRSYYKCTHPSCPVKKKVERSL-DGKIAEIVYKGEHDHPK 253
                     9***************************************.***************85 PP
2WRKY857e-27393448459
                     SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   4 gynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     g +WrKYGqK+vkg+ +prsYYrCt  +C+++k ver++e p+ +++tYeg+Hnh+
  XP_022983958.1 393 GIRWRKYGQKVVKGNLYPRSYYRCTGLKCKARKYVERASEVPDSFITTYEGKHNHD 448
                     679****************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    
MDNKAAERVV VARPVASRPT CSSFKSFSDI LACAFNTSPP NMSSETTKVA AIRPKTVRFK  60
LKDNPAPSPM AKISETAPRT ISCSSSDNLA ISDSKTTVLF KPLAKHVSKQ TVSQLSHIGN  120
TNLQNCLPHP PDKDSIQCPN QGKDNVQSAL TSNLPQNITS TVENSQSIES SRVTLNYSKE  180
DPTLLHSQVS CAQPSYDGYN WRKYGQKKVK GSKYPRSYYK CTHPSCPVKK KVERSLDGKI  240
AEIVYKGEHD HPKPQPLKLN SSGTPGEGSI SDGTVRDTNP KLWLYYLNGQ IEGSESQLEN  300
HIEKTCQGTV TLPFDPVVVR EVHTGCRISD NSCGLSVECE EGSKGLESTG DKLRSKRRGG  360
KNPTNEADIS IEGVYEHHAM ARCSADIEIS GKGIRWRKYG QKVVKGNLYP RSYYRCTGLK  420
CKARKYVERA SEVPDSFITT YEGKHNHDIS LGNANHVAPQ ME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.13e-83WRKY family protein