PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983635.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 409aa MW: 45342.4 Da PI: 8.4789

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	222	275	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave+LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_022983635.1 222 PRMRWTTSLHARFVHAVEHLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 275 8****************************************************7 PP
2	Myb_DNA-binding	48.5	2.1e-15	223	274	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av+ lGg+ t+k++ + m k +tl ++ks++q+y+ XP_022983635.1 223 RMRWTTSLHARFVHAVEHLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 274 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP 60 RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL 120 GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFNNG VVSIEAVKSL 180 NYNNHSNYSN AASSSSDVCS HGMMMRSRFL QKLPAKRSMR SPRMRWTTSL HARFVHAVEH 240 LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVRTTD KPAASSGQSD GSGEDEVSPT 300 LGTTSGDHGP KQFSDQRASP DRSSQQSPDL EFGSSTLWSN SSRDVWAQTN ANEMDVIRPS 360 LYTPMKMQQK CMHQIQECDS GAMKRYSSEC NKPSLEFRLG RAEWDVKEH

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MPLEGVFIEP SSTPLPDLSL QISPPNVSSS SSSSSSSSIR TLSHGFPQTS FDLLIQRNDP  60
RARTELSLGS NNSNSLSGVP LDTPTRPPHL RGLSMFDVSS DGLQPIKGIP VYYNRPFPFL  120
GVDQKDQYFH HQFPSPCFFP NYSNSNGIVQ MGYHHRGIGG NNSSSRFNNG VVSIEAVKSL  180
NYNNHSNYSN AASSSSDVCS HGMMMRSRFL QKLPAKRSMR SPRMRWTTSL HARFVHAVEH  240
LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVRTTD KPAASSGQSD GSGEDEVSPT  300
LGTTSGDHGP KQFSDQRASP DRSSQQSPDL EFGSSTLWSN SSRDVWAQTN ANEMDVIRPS  360
LYTPMKMQQK CMHQIQECDS GAMKRYSSEC NKPSLEFRLG RAEWDVKEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-56	G2-like family protein