PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022983565.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 292aa    MW: 32469.8 Da    PI: 8.1133
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022983565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.93.7e-113583147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g      +  q++s+ qky
   XP_022983565.1 35 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVGsktVIQSMLQIRSHAQKY 83
                     789*****************77.*********77744578899***9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MNSNASNPHT SMATSSAADS SGKKVRKPYT ITKSRESWTE EEHDKFLEAL QLFDRDWKKI  60
EDFVGSKTVI QSMLQIRSHA QKYFLKVQKN GTIAHVPPPR PKRKASHPYP QKASKNVLVP  120
MQASMAYPSS VNTLALGYCP WEDASIMINP SSCKVTHPQD EFTNLHRSET ENASEGTPMI  180
NSNSLNVIGS PDTGKQGKQA PMLHGLPDFA EVYGFIGSVF DPESKEHVNK LKEMDPINFE  240
TVLLLMRNLT FNLSSPDFEP LRSVLSTYDV NTKTVAVTAG VPTKKHTDDI SC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-118MYB_related family protein