PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983392.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 287aa MW: 32498.3 Da PI: 6.798

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.4	3.7e-36	85	192	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaks 97 gkkdrhski+T++g+RdRRvRls+++a++fFdLqd+LG+dk+skt+eWL+ ++ +aikel +++ + + + XP_022983392.1 85 GKKDRHSKIYTAQGLRDRRVRLSIDIARKFFDLQDMLGYDKASKTLEWLFGKSRKAIKELSRSKYGNV------------------------EDK 155 8**************************************************************43333........................122 PP TCP 98 kksqksaasalnlakesrakararare.rtrekmrik 133 ++++++ + ++ lakesrakarara + + +++ ++ XP_022983392.1 156 EEDSEKVEVFNLLAKESRAKARARATDdDDDNDNDND 192 3444455556888889999999999884444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MASSSFNLNP FPCFPLAFPS LLNHDPSPNN PTFNFNQPHL DPLSFLPPYF PIAHFSASAT 60 GNSIQALGDI PSALTVGTGT GTRMGKKDRH SKIYTAQGLR DRRVRLSIDI ARKFFDLQDM 120 LGYDKASKTL EWLFGKSRKA IKELSRSKYG NVEDKEEDSE KVEVFNLLAK ESRAKARARA 180 TDDDDDNDND NDNDKKYYGH QMSHVEEVSD HWSTETSNLS MEEYSFMNKR RICAIKFIGG 240 DDNENMKPCR DDDAEASKGH LQEHSMIKRK WKASSIDGIP SYPFSKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67260.2	5e-29	TCP family protein