PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983372.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 467aa MW: 52532.5 Da PI: 6.7048

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.6	9.4e-34	101	192	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+++++ed++++ ++sw + g+sfvv+d+ ef++ +Lp+ Fkh+nf+SFvRQLn+YgF+k+++++ weF++ F++gkk ll++ XP_022983372.1 101 FLWKTFDLVEDPAIDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYGFRKIDTDK---------WEFANVAFQRGKKYLLKN 186 99*************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_022983372.1 187 IQRRKS 192 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MGCRHEQRFN CRAATTRFPV TVSTAFEFLS PDFYRTLRRR NSPSIGGFSV QNPMSSSSAH 60 YLFDVMLEPD IGVSDPYVVP CMGSDLPQPL ECLHGQLVPP FLWKTFDLVE DPAIDPIVSW 120 GSAGQSFVVW DPVEFSRVIL PSNFKHNNFS SFVRQLNTYG FRKIDTDKWE FANVAFQRGK 180 KYLLKNIQRR KSPHSEQVGS LIGPSTGGGK SGLEDEIGKL KKERSMLLQE VVELQQQHKG 240 TAQHVITVNR RLRSAEQRQK QMITFLSKLL RNPELLFHLK KNKEPKDIDS ERIKRKFVKQ 300 HKHDGCTLSM EGKIETAMDL NPSLFEGPSA YLMQGMGSFP DSIPDFQLMN ASSSDLIASE 360 ELAFHDGIVK PREELRIEAS KAIGSPDYFG SLAEDILQSS HHGTGSIIKP EEIWNAYLNV 420 DASTPGSSNE LWSNPVGFED QFWQVSCGQS PIWDLGSQQA GDLGMDK

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MGCRHEQRFN CRAATTRFPV TVSTAFEFLS PDFYRTLRRR NSPSIGGFSV QNPMSSSSAH  60
YLFDVMLEPD IGVSDPYVVP CMGSDLPQPL ECLHGQLVPP FLWKTFDLVE DPAIDPIVSW  120
GSAGQSFVVW DPVEFSRVIL PSNFKHNNFS SFVRQLNTYG FRKIDTDKWE FANVAFQRGK  180
KYLLKNIQRR KSPHSEQVGS LIGPSTGGGK SGLEDEIGKL KKERSMLLQE VVELQQQHKG  240
TAQHVITVNR RLRSAEQRQK QMITFLSKLL RNPELLFHLK KNKEPKDIDS ERIKRKFVKQ  300
HKHDGCTLSM EGKIETAMDL NPSLFEGPSA YLMQGMGSFP DSIPDFQLMN ASSSDLIASE  360
ELAFHDGIVK PREELRIEAS KAIGSPDYFG SLAEDILQSS HHGTGSIIKP EEIWNAYLNV  420
DASTPGSSNE LWSNPVGFED QFWQVSCGQS PIWDLGSQQA GDLGMDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	6e-82	HSF family protein