PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983326.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 617aa MW: 69526.7 Da PI: 4.9563

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.3	0.00015	441	478	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s Lek+++++ +Lq XP_022983326.1 441 RQLIQDRIKELRQMVPNgA------KCSIDGLLEKTIKHMLYLQ 478 77799**********66......999999*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MDFSLQLWIH YHQSLTVGSV ANSGNHSWVF LENIFTSDLT SASIYEGPTE WLIQYASGIK 60 TILLVPVLPF GVLQLGSLQM VTENLSAVAS IKDRFSAINF IDGNATSIAP HKGAWPLCAS 120 VVPSPFESLN EQANFTIYMM EAQNHRAIED SKPPVATLNP SVTIQDELTV TRRIRLETLH 180 GEGDMLRINM EASFTPLYQS IRASELEFSD LFSLESLLPP CSRLRNDETG LIESTPRIVN 240 SYPVDNVVEQ QSGHNLVTKK EYGTADSLFS FPDDCELQKA FGPAFFAQKH STDFSYDLSS 300 TINDTTASLL CSRDFKEGDI ELLLDAMMPA FPNSVDTFSN NTINGRIAPV ERNSSLSAKT 360 CESESSAMVM DDPALWIFPE STATEIGRKT LTSLSTSNST VINELEENDR DITRHRKGMK 420 RFNCSPDIKM TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK CSIDGLLEKT IKHMLYLQRV 480 TDQAEKLKQL AQQEEGFDSE YCTDLGDESF QSNGTSWTRA FDIGSELQVC PIVVEDLEYH 540 GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN SRAHFVVEAP RGFHRMDVFW 600 PLMHLLQRQR NPLSCRI

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MDFSLQLWIH YHQSLTVGSV ANSGNHSWVF LENIFTSDLT SASIYEGPTE WLIQYASGIK  60
TILLVPVLPF GVLQLGSLQM VTENLSAVAS IKDRFSAINF IDGNATSIAP HKGAWPLCAS  120
VVPSPFESLN EQANFTIYMM EAQNHRAIED SKPPVATLNP SVTIQDELTV TRRIRLETLH  180
GEGDMLRINM EASFTPLYQS IRASELEFSD LFSLESLLPP CSRLRNDETG LIESTPRIVN  240
SYPVDNVVEQ QSGHNLVTKK EYGTADSLFS FPDDCELQKA FGPAFFAQKH STDFSYDLSS  300
TINDTTASLL CSRDFKEGDI ELLLDAMMPA FPNSVDTFSN NTINGRIAPV ERNSSLSAKT  360
CESESSAMVM DDPALWIFPE STATEIGRKT LTSLSTSNST VINELEENDR DITRHRKGMK  420
RFNCSPDIKM TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK CSIDGLLEKT IKHMLYLQRV  480
TDQAEKLKQL AQQEEGFDSE YCTDLGDESF QSNGTSWTRA FDIGSELQVC PIVVEDLEYH  540
GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN SRAHFVVEAP RGFHRMDVFW  600
PLMHLLQRQR NPLSCRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	4e-43	bHLH family protein