PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983325.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 697aa MW: 78470.6 Da PI: 4.9127

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.1	0.00018	521	558	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr+++P+ a K s Lek+++++ +Lq XP_022983325.1 521 RQLIQDRIKELRQMVPNgA------KCSIDGLLEKTIKHMLYLQ 558 77799**********66......999999*********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
METSALNQLL RSLCSNSQWI YAVFWKIKYH SSTILTWEDG YCNYSKLENH MGRTTDGMIK 60 DRDEHVSSYY GDSGNCSVDP AVADMFCRQY ALGEGTVGSV ANSGNHSWVF LENIFTSDLT 120 SASIYEGPTE WLIQYASGIK TILLVPVLPF GVLQLGSLQM VTENLSAVAS IKDRFSAINF 180 IDGNATSIAP HKGAWPLCAS VVPSPFESLN EQANFTIYMM EAQNHRAIED SKPPVATLNP 240 SVTIQDELTV TRRIRLETLH GEGDMLRINM EASFTPLYQS IRASELEFSD LFSLESLLPP 300 CSRLRNDETG LIESTPRIVN SYPVDNVVEQ QSGHNLVTKK EYGTADSLFS FPDDCELQKA 360 FGPAFFAQKH STDFSYDLSS TINDTTASLL CSRDFKEGDI ELLLDAMMPA FPNSVDTFSN 420 NTINGRIAPV ERNSSLSAKT CESESSAMVM DDPALWIFPE STATEIGRKT LTSLSTSNST 480 VINELEENDR DITRHRKGMK RFNCSPDIKM TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK 540 CSIDGLLEKT IKHMLYLQRV TDQAEKLKQL AQQEEGFDSE YCTDLGDESF QSNGTSWTRA 600 FDIGSELQVC PIVVEDLEYH GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN 660 SRAHFVVEAP RGFHRMDVFW PLMHLLQRQR NPLSCRI

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

METSALNQLL RSLCSNSQWI YAVFWKIKYH SSTILTWEDG YCNYSKLENH MGRTTDGMIK  60
DRDEHVSSYY GDSGNCSVDP AVADMFCRQY ALGEGTVGSV ANSGNHSWVF LENIFTSDLT  120
SASIYEGPTE WLIQYASGIK TILLVPVLPF GVLQLGSLQM VTENLSAVAS IKDRFSAINF  180
IDGNATSIAP HKGAWPLCAS VVPSPFESLN EQANFTIYMM EAQNHRAIED SKPPVATLNP  240
SVTIQDELTV TRRIRLETLH GEGDMLRINM EASFTPLYQS IRASELEFSD LFSLESLLPP  300
CSRLRNDETG LIESTPRIVN SYPVDNVVEQ QSGHNLVTKK EYGTADSLFS FPDDCELQKA  360
FGPAFFAQKH STDFSYDLSS TINDTTASLL CSRDFKEGDI ELLLDAMMPA FPNSVDTFSN  420
NTINGRIAPV ERNSSLSAKT CESESSAMVM DDPALWIFPE STATEIGRKT LTSLSTSNST  480
VINELEENDR DITRHRKGMK RFNCSPDIKM TSKTRQRPRD RQLIQDRIKE LRQMVPNGAK  540
CSIDGLLEKT IKHMLYLQRV TDQAEKLKQL AQQEEGFDSE YCTDLGDESF QSNGTSWTRA  600
FDIGSELQVC PIVVEDLEYH GHMLIKMLCN DTELFLEIAQ IIRNLELTIL KGVVERHSNN  660
SRAHFVVEAP RGFHRMDVFW PLMHLLQRQR NPLSCRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	6e-43	bHLH family protein