PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022983183.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 475aa MW: 51684.9 Da PI: 7.5221

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022983183.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.4	3.1e-33	169	225	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh XP_022983183.1 169 NDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-DGQITEIVYKGSHNHA 225 7**************************************.*************7 PP
2	WRKY	105.9	2e-33	318	375	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++prsYY+Cts gCpv+k++er+a+d+++v++tYeg+Hnhe XP_022983183.1 318 PDGYRWRKYGQKVVKGNPNPRSYYKCTSLGCPVRKHIERAANDTRAVITTYEGKHNHE 375 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MNNINQSINT VAGGSCEKRT NGLGMEAPKF KSLQPPPFPM SPSSYLSAFS SGLSPTELLN 60 SPLFSFGLFP SPTTGSFNLR NDYDDADHHE MKADAKNYSY SSFNPQTRSS VSSYFQSSSS 120 NVTLPNPGGL SCDESGAKSE VVATDMAAAQ SNPVSQLPVY NREQKKSEND GYNWRKYGQK 180 QVKGSENPRS YYKCTFPNCP TKKKVERSLD GQITEIVYKG SHNHAKPQPT RRSGNSAVYD 240 PSAAESTLLL EDSSVSVGDD EVEPNSPFSN SVDDNENEPE SKRWKGENEN EGFSGGGSRT 300 VKEPRIVVQT TSEIDILPDG YRWRKYGQKV VKGNPNPRSY YKCTSLGCPV RKHIERAAND 360 TRAVITTYEG KHNHEVPAAR GGGGSFYNAV NRPVPASIPM PVRPSAAVSH SFPTNFPASF 420 LAGNINMSEI GARAAPSSFP FQTSQGVPPS FQVSGFGTAA KEEAEDNMFF NSFLS

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MNNINQSINT VAGGSCEKRT NGLGMEAPKF KSLQPPPFPM SPSSYLSAFS SGLSPTELLN  60
SPLFSFGLFP SPTTGSFNLR NDYDDADHHE MKADAKNYSY SSFNPQTRSS VSSYFQSSSS  120
NVTLPNPGGL SCDESGAKSE VVATDMAAAQ SNPVSQLPVY NREQKKSEND GYNWRKYGQK  180
QVKGSENPRS YYKCTFPNCP TKKKVERSLD GQITEIVYKG SHNHAKPQPT RRSGNSAVYD  240
PSAAESTLLL EDSSVSVGDD EVEPNSPFSN SVDDNENEPE SKRWKGENEN EGFSGGGSRT  300
VKEPRIVVQT TSEIDILPDG YRWRKYGQKV VKGNPNPRSY YKCTSLGCPV RKHIERAAND  360
TRAVITTYEG KHNHEVPAAR GGGGSFYNAV NRPVPASIPM PVRPSAAVSH SFPTNFPASF  420
LAGNINMSEI GARAAPSSFP FQTSQGVPPS FQVSGFGTAA KEEAEDNMFF NSFLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein