PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022982944.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Trihelix

Protein Properties

Length: 462aa MW: 52514.6 Da PI: 5.7711

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022982944.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	77.7	1.7e-24	107	206	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpy 81 +Wt+ +v++Li+a+ +++++ +++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ ++++++++ + XP_022982944.1 107 KWTDMMVRLLITAVFYIGDEGGSEPmdhaskkkpvgllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENHTL 201 7************99999998655556678889999******************************************55******* PP trihelix 82 fdqle 86 ++++e XP_022982944.1 202 LESME 206 *9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MEPNSLGGGG GASGGMFPGI SSSMLGLELP LHQIPSNPHQ LHHPPMVSYV PHEAHHQQQP 60 PPAAVKCPYP AKPKPQQSNV SDEEEQGLAD DSNSDAKKKI SPWQRMKWTD MMVRLLITAV 120 FYIGDEGGSE PMDHASKKKP VGLLQKKGKW KSVSRAMMEK GFYVSPQQCE DKFNDLNKRY 180 KRVNDILGKG TACRVVENHT LLESMELTPK VKEEVRKLLN SKHLFFREMC AYHNTCRHGA 240 GNSGGGGANT LPETGAEPSH LPQQQQQQRC FHATETAPVA TAGEGSKSGD EEEEDEDEDD 300 ESEEDDEEEE EEEEEVEGSS RVQEEEEETE SKKRGRKEGF TAGIQQMSAE VMGVVQDGGR 360 SPWEKKQWMK RRLIQLEEQQ VKYQSQGLEI EKQRLKWLKF RRKKERDMER AKLENEKRRL 420 ENERMMLMVK QKELDLTDLH NYQQQQQQHS SNRRGDPSSI TG

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MEPNSLGGGG GASGGMFPGI SSSMLGLELP LHQIPSNPHQ LHHPPMVSYV PHEAHHQQQP  60
PPAAVKCPYP AKPKPQQSNV SDEEEQGLAD DSNSDAKKKI SPWQRMKWTD MMVRLLITAV  120
FYIGDEGGSE PMDHASKKKP VGLLQKKGKW KSVSRAMMEK GFYVSPQQCE DKFNDLNKRY  180
KRVNDILGKG TACRVVENHT LLESMELTPK VKEEVRKLLN SKHLFFREMC AYHNTCRHGA  240
GNSGGGGANT LPETGAEPSH LPQQQQQQRC FHATETAPVA TAGEGSKSGD EEEEDEDEDD  300
ESEEDDEEEE EEEEEVEGSS RVQEEEEETE SKKRGRKEGF TAGIQQMSAE VMGVVQDGGR  360
SPWEKKQWMK RRLIQLEEQQ VKYQSQGLEI EKQRLKWLKF RRKKERDMER AKLENEKRRL  420
ENERMMLMVK QKELDLTDLH NYQQQQQQHS SNRRGDPSSI TG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	392	404	KQRLKWLKFRRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	3e-73	Trihelix family protein